H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000087955 Last modified: 27-May-2015
Definition: Heat shock 70 kDa protein 6; Heat shock 70 kDa protein B';
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000087955
Length 643
Codon Adaptation Index (CAI). 0.845
Database links RefSeq NA
UniProt P17066 ;
CCDS P17066;
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000051463
H-Inv cluster ID Locus view HIX0213770
Predicted CDS 110..2041 ; 643[aa] ; Orientation:+2 ;
Genomic location Chromosome 1
Location 1q23.3
CDS position 161494340-161496580
Strand +
Accession number BC035665.1
CAGE tag ID NA
EST ID NA
Clone Number MGC:46216 IMAGE:5723718
Experimental resources NBRC: NITE Biological Resource Center NBRC     Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (HSPA6) ;   Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (HSPA6) ;
Length of cDNA 2279[bp] (No. of exon:1)[A:528 T:403 G:711 C:637] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3310 ;
KEGG GENES KEGG GENES(3310) ;
GeneCard GeneCard HSPA6 ;
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view


Coresponding transcript member (s)
No.1
H-Inv IDTranscript view HIT000051463
H-Inv cluster IDLocus view HIX0213770
Accession numberBC035665.1
CAGE tag IDNA
EST IDNA
Coding potential Help Protein coding
DefinitionHeat shock 70 kDa protein 6; Heat shock 70 kDa protein B';
Similarity category HelpIdentical to known human protein(Category I).
Identical to known human protein (P17066) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Transcript feature Help Representative H-Inv IDRepresentative transcript;
Genomic Location G-integra Help Chromosome1
Location1q23.3
CDS position161494340-161496580
Strand+
Gene structure1 exons

Motif information in predicted CDS
ORF

length(644),orf(110:2041)
MQAPRELAVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTE
RLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEG
GKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPA
YFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIF
DLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRK
HGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT
RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQK
LLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAP
LSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERA
MTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKA
NKITITNDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFH
VKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRE
LEQICRPIFSRLYGGPGVPGGSSCGTQARQGDPSTGPIIEEVD*
a.a.
length
InterPro Name
length(14), motif(7:20) 14IPR013126Heat shock protein 70 family [Family]
length(606), motif(8:613) 606IPR013126Heat shock protein 70 family [Family]
length(8), motif(11:18) 8IPR018181Heat shock protein 70, conserved site [Conserved_site]
length(13), motif(35:47) 13IPR013126Heat shock protein 70 family [Family]
length(9), motif(57:65) 9IPR013126Heat shock protein 70 family [Family]
length(21), motif(144:164) 21IPR013126Heat shock protein 70 family [Family]
length(14), motif(199:212) 14IPR018181Heat shock protein 70, conserved site [Conserved_site]
length(11), motif(205:215) 11IPR013126Heat shock protein 70 family [Family]
length(17), motif(333:349) 17IPR013126Heat shock protein 70 family [Family]
length(15), motif(336:350) 15IPR018181Heat shock protein 70, conserved site [Conserved_site]
length(21), motif(365:385) 21IPR013126Heat shock protein 70 family [Family]
length(158), motif(388:545) 158IPR029047Heat shock protein 70kD, peptide-binding domain [Domain]
length(20), motif(392:411) 20IPR013126Heat shock protein 70 family [Family]
length(127), motif(394:520) 127IPR029047Heat shock protein 70kD, peptide-binding domain [Domain]
length(17), motif(473:489) 17IPR013126Heat shock protein 70 family [Family]
length(101), motif(521:621) 101IPR029048Heat shock protein 70kD, C-terminal domain [Domain]
length(82), motif(540:621) 82IPR029048Heat shock protein 70kD, C-terminal domain [Domain]

Protein function information
H-Inv protein ID HIP000087955
Representative H-Inv transcript ID Transcript view HIT000051463
H-Inv cluster ID Locus view HIX0213770
Definition Heat shock 70 kDa protein 6; Heat shock 70 kDa protein B';
Similarity category Help Identical to known human protein(Category I).
Identical to known human protein (P17066) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
EC number NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer No. of interaction 23
Interaction partner(s) HIP000022138; HIP000022251; HIP000027819; HIP000027819; HIP000028809; HIP000030888; HIP000030888; HIP000031403; HIP000031403; HIP000031586; HIP000034328; HIP000034328; HIP000035708; HIP000045275; HIP000045286; HIP000068392; HIP000070499; HIP000072479; HIP000072479; HIP000086898; HIP000107309; HIP000247082; HIP000354287;
BIND NA
DIP 145030E; 180168E;
MINT MINT-1785982; MINT-48155; MINT-48290; MINT-48405; MINT-48577; MINT-48649; MINT-48803; MINT-48987; MINT-49059; MINT-49165; MINT-49309; MINT-49390; MINT-7947479;
HPRD 01238; 01239; 01286; 01861; 01862; 03144; 03897; 03965; 04184; 04585; 05230; 05496; 06232; 06886; 06888; 07486; 07601; 14358; 16246; 19599;
IntAct NA
Database links RefSeq NA
UniProt P17066 ;
CCDS P17066;
Gene symbol/name HGNC symbol HSPA6
HGNC aliases "heat shock 70kD protein 6 (HSP70B')";
HGNC name heat shock 70kDa protein 6 (HSP70B');
Related H-InvDB links G-integraG-integra ; PPI viewer PPI view ; TACT TACT ;

Glycosylation
GPDB (GlycoProtDB)
GPDB
ID NA
Protein name NA
Organism NA
Length(aa) NA

Subcellular localization information
WoLF PSORT cytosol;
Target P Other
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP) GTOP Last modified : 27-May-2015
Start End PDB_ID E-value Identity Coverage SCOP_ID
5 190 1atrA1 3e-21 80.6 186/187 c.55.1.1
193 386 1atrA2 2e-53 79.4 194/196 c.55.1.1
406 545 3c7nB1 1e-53 77.9 140/154 b.130.1.1
540 613 1ud0A 3e-27 47.3 74/84 a.8.4.1
Related H-InvDB links GTOP GTOP

Translation polymorphism (SNP) and microsatellite (STR) information

Single Nucleotide Polymorphism (SNP) and indel VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
256..256 C/G rs3754052 - CDS Synonymous[Thr49Thr]
302..302 C/A rs41297698 + CDS Nonsynonymous[Pro65Thr]
339..339 G/C rs150647842 + CDS Nonsynonymous[Gly77Ala]
383..383 T/G rs143602691 + CDS Nonsynonymous[Trp92Gly]
392..392 C/G rs201325536 + CDS Nonsynonymous[Arg95Gly]
393..393 G/A rs400835 + CDS Nonsynonymous[Arg95Gln]
403..403 C/G rs199752876 + CDS Nonsynonymous[Ser98Arg]
422..422 G/T rs140716677 + CDS Nonsynonymous[Val105Leu]
430..430 A/G rs145333180 + CDS Synonymous[Val107Val]
454..454 G/A rs201874695 + CDS Synonymous[Thr115Thr]
557..557 G/A rs10919224 + CDS Nonsynonymous[Ala150Thr]
567..567 A/G rs10919225 + CDS Nonsynonymous[Asn153Ser]
569..569 G/A rs10919226 + CDS Nonsynonymous[Asp154Asn]
578..578 C/A rs142879773 + CDS Nonsynonymous[Arg157Ser]
585..585 C/T rs41297702 + CDS Nonsynonymous[Ala159Val]
588..588 C/T rs138021734 + CDS Nonsynonymous[Thr160Ile]
619..619 C/G rs41297704 + CDS Nonsynonymous[Asn170Lys]
623..623 T/C rs41297706 + CDS Synonymous[Leu172Leu]
627..627 G/C rs41297708 + CDS Nonsynonymous[Arg173Pro]
634..634 C/T rs144265854 + CDS Synonymous[Ile175Ile]
641..641 C/G rs41297710 + CDS Nonsynonymous[Pro178Ala]
652..652 T/A rs41297712 + CDS Synonymous[Ala181Ala]
684..684 C/G rs28716417 + CDS Nonsynonymous[Ala192Gly]
689..689 G/A rs41297714 + CDS Nonsynonymous[Glu194Lys]
698..698 G/A rs139552185 + CDS Nonsynonymous[Val197Met]
701..701 C/T rs63749092 + CDS Nonsynonymous[Leu198Phe]
701..701 C/T rs1079109 + CDS Nonsynonymous[Leu198Phe]
726..726 C/T rs149827217 + CDS Nonsynonymous[Thr206Ile]
745..745 C/G rs142060516 + CDS Synonymous[Leu212Leu]
778..778 C/T rs41297716 + CDS Synonymous[Ala223Ala]
809..809 G/A rs147002100 + CDS Nonsynonymous[Asp234Asn]
915..915 G/A rs141711758 + CDS Nonsynonymous[Cys269Tyr]
921..921 G/A rs138613886 + CDS Nonsynonymous[Arg271His]
936..936 T/C rs200790521 + CDS Nonsynonymous[Leu276Pro]
958..958 C/T rs146341078 + CDS Synonymous[Thr283Thr]
965..965 A/C rs142781522 + CDS Nonsynonymous[Ile286Leu]
999..999 C/A rs41297718 + CDS Nonsynonymous[Thr297Lys]
1008..1008 C/T rs148797832 + CDS Nonsynonymous[Thr300Ile]
1028..1028 C/T rs151297860 + CDS Synonymous[Leu307Leu]
1033..1033 C/T rs55898103 + CDS Synonymous[Cys308Cys]
1080..1080 G/A rs144281379 + CDS Nonsynonymous[Arg324Gln]
1090..1090 G/A rs141086137 + CDS Synonymous[Lys327Lys]
1115..1115 G/T rs417707 - CDS Nonsynonymous[Val336Phe]
1124..1124 G/A rs142859332 + CDS Nonsynonymous[Val339Met]
1128..1128 G/A rs12119062 + CDS Nonsynonymous[Gly340Glu]
1129..1129 G/A rs143204924 + CDS Synonymous[Gly340Gly]
1130..1130 G/A rs141771248 + CDS Nonsynonymous[Gly341Ser]
1131..1131 G/A rs138329594 + CDS Nonsynonymous[Gly341Asp]
1138..1138 T/A rs72633678 + CDS Synonymous[Thr343Thr]
1138..1138 T/A rs17853454 + CDS Synonymous[Thr343Thr]
1158..1158 A/G rs144853604 + CDS Nonsynonymous[Lys350Arg]
1181..1181 G/A rs200985857 + CDS Nonsynonymous[Gly358Ser]
1232..1232 G/T rs140052915 + CDS Nonsynonymous[Ala375Ser]
1232..1232 G/T rs9659608 + CDS Nonsynonymous[Ala375Ser]
1353..1353 T/C rs139557364 + CDS Nonsynonymous[Leu415Pro]
1360..1360 G/C rs150927976 + CDS Nonsynonymous[Gln417His]
1396..1396 T/G rs41297720 + CDS Synonymous[Thr429Thr]
1410..1410 C/T rs200111192 + CDS Nonsynonymous[Ser434Leu]
1418..1418 C/T rs140320557 + CDS AA-STOP[Gln437*]
1427..1427 G/A rs11577457 + CDS Nonsynonymous[Val440Ile]
1443..1443 A/G rs145456895 + CDS Nonsynonymous[Tyr445Cys]
1449..1449 G/T rs56366425 + CDS Nonsynonymous[Gly447Val]
1449..1449 G/T rs450363 + CDS Nonsynonymous[Gly447Val]
1484..1484 G/A rs200236588 + CDS Nonsynonymous[Gly459Arg]
1500..1500 G/T rs388218 - CDS Nonsynonymous[Ser464Ile]
1504..1504 C/A rs141425292 + CDS Synonymous[Gly465Gly]
1518..1518 C/T rs185517137 + CDS Nonsynonymous[Pro470Leu]
1521..1521 G/A rs41299256 + CDS Nonsynonymous[Arg471His]
1546..1546 C/T/G rs404508 - CDS
1572..1572 T/C rs147297153 + CDS Nonsynonymous[Leu488Pro]
1590..1590 A/T rs200558605 + CDS Nonsynonymous[Asp494Val]
1610..1610 A/G rs143965374 + CDS Nonsynonymous[Asn501Asp]
1638..1638 G/A rs148603479 + CDS Nonsynonymous[Gly510Asp]
1671..1671 T/G rs199677197 + CDS Nonsynonymous[Val521Gly]
1691..1691 A/G rs79983347 + CDS Nonsynonymous[Lys528Glu]
1691..1691 A/G rs570189 - CDS Nonsynonymous[Lys528Glu]
1692..1692 A/G rs570167 - CDS Nonsynonymous[Lys528Arg]
1700..1700 G/C rs200404972 + CDS Nonsynonymous[Asp531His]
1703..1703 G/A rs3820450 - CDS Nonsynonymous[Glu532Lys]
1714..1714 G/A rs140399106 + CDS Synonymous[Arg535Arg]
1795..1795 C/G rs753856 - CDS Nonsynonymous[Asp562Glu]
1817..1817 C/T rs140843448 + CDS Nonsynonymous[Arg570Cys]
1823..1823 A/G rs452004 - CDS Nonsynonymous[Met572Val]
1838..1838 C/T rs189929972 + CDS Nonsynonymous[Arg577Trp]
1839..1839 G/A rs368844 - CDS Nonsynonymous[Arg577Gln]
1959..1959 G/C rs138819450 + CDS Nonsynonymous[Gly617Ala]
1978..1978 T/C rs138336769 + CDS Synonymous[Ser623Ser]
1982..1982 G/A rs439078 - CDS Nonsynonymous[Gly625Ser]
1985..1985 A/G rs41299260 + CDS Nonsynonymous[Thr626Ala]
1995..1995 G/A rs52798304 + CDS Nonsynonymous[Arg629His]
2025..2025 T/C rs199535758 + CDS Nonsynonymous[Ile639Thr]
2030..2030 G/A rs144080022 + CDS Nonsynonymous[Glu641Lys]
Microsatellite (Short Tandem Repeat, STR)
LocationVariationStrand
No data available
Related H-InvDB links
VaryGeneVaryGene ;