H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000089515 Last modified: 27-May-2015
Definition: Left-right determination factor 1; Left-right determination factor B; Protein lefty-1; Protein lefty-B; Precursor;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Motif information in predicted CDS
ORF

length(367),orf(68:1168)
MQPLWLCWALWVLPLASPGAALTGEQLLGSLLRQLQLKEVPTLDRADMEE
LVIPTHVRAQYVALLQRSHGDRSRGKRFSQSFREVAGRFLALEASTHLLV
FGMEQRLPPNSELVQAVLRLFQEPVPKAALHRHGRLSPRSARARVTVEWL
RVRDDGSNRTSLIDSRLVSVHESGWKAFDVTEAVNFWQQLSRPRQPLLLQ
VSVQREHLGPLASGAHKLVRFASQGAPAGLGEPQLELHTLDLGDYGAQGD
CDPEAPMTEGTRCCRQEMYIDLQGMKWAENWVLEPPGFLAYECVGTCRQP
PEALAFKWPFLGPRQCIASETDSLPMIVSIKEGGRTRPQVVSLPNMRVQK
CSCASDGALVPRRLQP*
a.a.
length
InterPro Name
length(354), motif(1:354) 354IPR015615Transforming growth factor-beta-related [Family]
length(23), motif(4:26) 23IPR003942Left- Right determination factor [Family]
length(190), motif(22:211) 190IPR001111Transforming growth factor-beta, N-terminal [Domain]
length(22), motif(26:47) 22IPR003942Left- Right determination factor [Family]
length(17), motif(49:65) 17IPR003942Left- Right determination factor [Family]
length(19), motif(72:90) 19IPR003942Left- Right determination factor [Family]
length(16), motif(97:112) 16IPR003942Left- Right determination factor [Family]
length(21), motif(112:132) 21IPR003942Left- Right determination factor [Family]
length(19), motif(132:150) 19IPR003942Left- Right determination factor [Family]
length(22), motif(153:174) 22IPR003942Left- Right determination factor [Family]
length(24), motif(187:210) 24IPR003942Left- Right determination factor [Family]
length(16), motif(216:231) 16IPR003942Left- Right determination factor [Family]
length(26), motif(234:259) 26IPR003942Left- Right determination factor [Family]
length(113), motif(242:354) 113IPR001839Transforming growth factor-beta, C-terminal [Domain]
length(95), motif(259:353) 95IPR029034Cystine-knot cytokine [Domain]
length(40), motif(262:301) 40IPR001839Transforming growth factor-beta, C-terminal [Domain]
length(92), motif(263:354) 92IPR001839Transforming growth factor-beta, C-terminal [Domain]
length(22), motif(265:286) 22IPR003942Left- Right determination factor [Family]
length(16), motif(282:297) 16IPR017948Transforming growth factor beta, conserved site [Conserved_site]
length(21), motif(299:319) 21IPR003942Left- Right determination factor [Family]
length(20), motif(325:344) 20IPR003942Left- Right determination factor [Family]