H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
ホーム クイックガイド 検索ナビ BLAST サイトマップ データダウンロード 問い合わせ ヘルプ
H-Inv protein ID: HIP000102300 Last modified: 27-May-2015
Definition: Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein annotation summary
H-Inv protein ID HIP000102300
Representative H-Inv transcript ID Transcript view HIT000059838
H-Inv cluster ID Locus view HIX0012849
Definitin Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category Help Identical to known human protein(Category I).
Identical to known human protein (Q96Q15) [Identity/coverage = 99.672%/100.0%] to Homo sapiens (Human). protein.
Gene family/group H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
EC number EC 2.7.11.1 non-specific serine/threonine protein kinase
KEGG metabolic pathway 04150 mTOR signaling pathway 04210 Apoptosis 04310 Wnt signaling pathway 04320 Dorso-ventral axis formation 04340 Hedgehog signaling pathway 04350 TGF-beta signaling pathway 04360 Axon guidance 04370 VEGF signaling pathway 04510 Focal adhesion 04520 Adherens junction 04530 Tight junction 04540 Gap junction 04620 Toll-like receptor signaling pathway 04630 Jak-STAT signaling pathway 04660 T cell receptor signaling pathway 04662 B cell receptor signaling pathway 04664 Fc epsilon RI signaling pathway 04720 Long-term potentiation 04730 Long-term depression 04810 Regulation of actin cytoskeleton 04910 Insulin signaling pathway 04912 GnRH signaling pathway 04920 Adipocytokine signaling pathway 05010 Alzheimer's disease 05210 Colorectal cancer
Protein-protein interaction (PPI) PPI viewer No. of interaction 17
Interaction partner(s) HIP000002034; HIP000024661; HIP000028573; HIP000031749; HIP000031749; HIP000037880; HIP000037880; HIP000055370; HIP000055554; HIP000059885; HIP000070663; HIP000070663; HIP000092348; HIP000092943; HIP000107322; HIP000175519; HIP000175519;
BIND 150589;
DIP 115764E;
MINT MINT-6539908;
HPRD 00561; 00713; 02105; 02334; 02616; 03062; 03075; 03254; 04005; 04484; 05247; 05609; 06482; 06734; 08544; 09143; 09274; 10016; 10405; 15946; 16070; 16869;
IntAct NA
Database links RefSeq NA
UniProt NA
CCDS NA
Genomic location G-integra Help Chromosome 16
Location 16p12.3
CDS position 18819082-18937738
Strand -
Notes
Protein view