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Transcript view Locus view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS |
H-Inv protein ID: | HIP000105531 | Last modified: | 27-May-2015 |
Definition: | Homeobox protein Hox-A13; Homeobox protein Hox-1J; |
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Coresponding transcript member (s) |
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No. | 1 | |
H-Inv ID | HIT000265606 | |
H-Inv cluster ID | HIX0201189 | |
Accession number | BC075791.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Homeobox protein Hox-A13; Homeobox protein Hox-1J; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P31271) [Identity/coverage = 99.742%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; | |
Genomic Location | Chromosome | 7 |
Location | 7p15.2 | |
CDS position | 27236577-27239725 | |
Strand | - | |
Gene structure | 2 exons |
Motif information in predicted CDS |
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a.a. length |
InterPro | Name |
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57 | IPR022067 | Homeobox protein Hox1A3 N-terminal [Domain] | |
101 | IPR022067 | Homeobox protein Hox1A3 N-terminal [Domain] | |
77 | IPR009057 | Homeodomain-like [Domain] | |
69 | IPR009057 | Homeodomain-like [Domain] | |
61 | IPR001356 | Homeobox domain [Domain] | |
63 | IPR001356 | Homeobox domain [Domain] | |
57 | IPR001356 | Homeobox domain [Domain] | |
24 | IPR017970 | Homeobox, conserved site [Conserved_site] |
Protein function information |
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H-Inv protein ID | HIP000105531 | |
Representative H-Inv transcript ID | HIT000265606 | |
H-Inv cluster ID | HIX0201189 | |
Definition | Homeobox protein Hox-A13; Homeobox protein Hox-1J; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P31271) [Identity/coverage = 99.742%/100.0%] to Homo sapiens (Human). protein. | ||
Gene family/group | H-Inv gene family/group ID | HIF0000005 |
Gene family/group name | Zinc finger, C2H2-type (IPR007087). | |
Evidence motif (InterPro) ID | 3 | |
EC number | NA | |
KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI) | No. of interaction | NA |
Interaction partner(s) | NA | |
BIND | NA | |
DIP | NA | |
MINT | NA | |
HPRD | NA | |
IntAct | NA | |
Database links | RefSeq | NA |
UniProt | NA | |
CCDS | NA | |
Gene symbol/name | HGNC symbol | NA |
HGNC aliases | NA | |
HGNC name | NA | |
Related H-InvDB links | G-integra ; PPI view ; TACT ; |
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Protein structure information (GTOP) | Last modified : 27-May-2015 |
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Evolutionary information |
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Relationship | Species | Accession number | MGI | Links |
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Orthology | Danio sp. (Zebrafish) | BC090761 | G-integra | |
Orthology | Bos sp. (Cow) | ENSBTAT00000046051 | G-integra | |
Orthology | Canis sp. (Dog) | ENSCAFT00000004756 | G-integra | |
Orthology | Gallus sp. (Chicken) | ENSGALT00000037816 | G-integra | |
Orthology | Mus sp. (Mouse) | ENSMUST00000047993 | G-integra | |
Orthology | Oryzias sp. (Medaka) | ENSORLT00000006356 | G-integra | |
Orthology | Pongo sp. (Orangutan) | ENSPPYT00000020620 | G-integra | |
Orthology | Rattus sp. (Rat) | ENSRNOT00000010441 | G-integra | |
Orthology | Tetraodon sp. (Tetraodon) | GSTENT00020457001 | G-integra | |
Orthology | Takifugu sp. (Fugu) | SINFRUT00000179640 | G-integra | |
Orthology | Monodelphis sp. (Opossum) | XM_001362439 | G-integra | |
Orthology | Pan sp. (Chimpanzee) | XM_527701 | G-integra |
Phylogenetic tree [View by ATV] | TNeighbor-joining (phb) |
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Related H-InvDB links | Evola; dN/dS; |
Translation polymorphism (SNP) and microsatellite (STR) information |
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