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 H-InvDB_9.0 released on May 27, 2015. | |
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| H-Inv protein ID: | HIP000144818 | Last modified: | 27-May-2015 |
| Definition: | Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R; | ||
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| Coresponding transcript member (s) |
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| No. | 1 | |
| H-Inv ID |  HIT000329449 | |
| H-Inv cluster ID |  HIX0001633 | |
| Accession number | AB209514.1 | |
| CAGE tag ID | NA | |
| EST ID | NA | |
Coding potential  |
Protein coding | |
| Definition | Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R; | |
| Similarity category | Identical to known human protein(Category I). | |
| Identical to known human protein (Q14739) [Identity/coverage = 99.837%/100.0%] to Homo sapiens (Human). protein. | ||
| Transcript feature |
NA | |
Genomic Location
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Chromosome | 1 |
| Location | 1q42.12 | |
| CDS position | 225590651-225615722 | |
| Strand | - | |
| Gene structure | 14 exons | |
| No. | 2 | |
| H-Inv ID | HIT000431124 | |
| H-Inv cluster ID | HIX0001633 | |
| Accession number | AK312258.1 | |
| CAGE tag ID | NA | |
| EST ID | NA | |
| Coding potential |
Protein coding | |
| Definition | Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R; | |
| Similarity category | Identical to known human protein(Category I). | |
| Identical to known human protein (Q14739) [Identity/coverage = 99.837%/100.0%] to Homo sapiens (Human). protein. | ||
| Transcript feature |
NA | |
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Genomic Location
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Chromosome | 1 |
| Location | 1q42.12 | |
| CDS position | 225591005-225615756 | |
| Strand | - | |
| Gene structure | 14 exons | |
| Motif information in predicted CDS |
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a.a. length |
InterPro | Name |
|---|---|---|---|
| 55 | IPR019023 | Lamin-B receptor of TUDOR domain [Domain] | |
| 59 | IPR002999 | Tudor domain [Domain] | |
| 415 | IPR001171 | Ergosterol biosynthesis ERG4/ERG24 [Family] | |
| 16 | IPR018083 | Sterol reductase, conserved site [Conserved_site] | |
| 24 | IPR018083 | Sterol reductase, conserved site [Conserved_site] |
| Protein function information |
|---|
| H-Inv protein ID | HIP000144818 | |
| Representative H-Inv transcript ID | HIT000329449 |
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| H-Inv cluster ID | HIX0001633 |
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| Definition | Lamin-B receptor; Integral nuclear envelope inner membrane protein; LMN2R; | |
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Similarity category
|
Identical to known human protein(Category I). | |
| Identical to known human protein (Q14739) [Identity/coverage = 99.837%/100.0%] to Homo sapiens (Human). protein. | ||
| Gene family/group | H-Inv gene family/group ID | NA |
| Gene family/group name | NA | |
| Evidence motif (InterPro) ID | NA | |
| EC number | NA | |
| KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI)
|
No. of interaction | 10 |
| Interaction partner(s) | HIP000024872; HIP000034263; HIP000034263; HIP000044851; HIP000062592; HIP000066190; HIP000067917; HIP000067917; HIP000075911; HIP000079588; | |
| BIND | NA | |
| DIP | 10830E; 10831E; 10832E; 112199E; 114313E; 77524E; | |
| MINT | MINT-50793; MINT-50938; MINT-7228149; | |
| HPRD | 01036; 01688; 01818; 03184; 05130; 05131; 05149; 05639; 10641; 10996; 15992; | |
| IntAct | NA | |
| Database links | RefSeq | NA |
| UniProt | NA | |
| CCDS | NA | |
| Gene symbol/name | HGNC symbol | LBR |
| HGNC aliases | NA | |
| HGNC name | lamin B receptor; | |
| Related H-InvDB links |
G-integra
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PPI view
;
 TACT
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Protein structure information (GTOP)
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Last modified : 27-May-2015 |
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| Translation polymorphism (SNP) and microsatellite (STR) information |
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![[Summery]](img/btn_Summary_active.png "[Summery]")
![[Full]](img/btn_Full_report_select.png "[Full]")
![[Protein Info]](img/btn_Protein_info_active.png "[Protein Info]")
![[Member]](img/btn_Member_active.png "[Member]")
![[Motif]
provide location, ID and descriptions of functional motifs (InterPro)](img/btn_Motif_active.png "[Motif]
provide location, ID and descriptions of functional motifs (InterPro)")
![[Function]
provide human-curated functional definition, similarity
category and related evidences; Gene name;
HUGO gene symbols; GO term; EC number; pathway information (KEGG)](img/btn_Function_active.png "[Function]
provide human-curated functional definition, similarity
category and related evidences; Gene name;
HUGO gene symbols; GO term; EC number; pathway information (KEGG)")
![[PTM]](img/btn_PTM_active.png "[PTM]")
![[Subcellular loc.]
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1](img/btn_Subcellular_active.png "[Subcellular loc.]
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1")
![[Protein Structure]](img/btn_Protein_active.png "[Protein Structure]")
![[Evolutionary info.]
provide orthologs relationships, phylogenic trees and sequence alignments](img/btn_Evolution_none.png "[Evolutionary info.]
provide orthologs relationships, phylogenic trees and sequence alignments")
![[Polymorphism/repeat]
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information](img/btn_Polymorphism_active.png "[Polymorphism/repeat]
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information")
Antibody (LBR) ; 
Catalog (LBR) ; 
LIFEdb;
