H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000216802 Last modified: 27-May-2015
Definition: Similar to Protocadherin gamma-C4; PCDH-gamma-C4; Precursor;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Motif information in predicted CDS
ORF

length(605),orf(93:1907)
MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQ
DFLLDTDSLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSA
SCIVPLEFVTEGPLEMYRAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQ
RFPLEKAQDADVGSNSISSYRLSSNEHFALDVKKRSDGSLVPELLLEKPL
DREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRIS
VLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG
KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYI
TVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSA
FRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPPLSTHRTIFLNISDVND
NPPSFFQRSHEVFVPENNRPGDLLCSLAASPECLHPRQQCHTDQRSWQAG
WQGPSRWQWQQEEVGQEGEEVTWRPGQEPQGSLSPTSPASPYLHPGLRVS
GLTPRILVGAKAMLPLGNRNKCPVSTYPFPPRGLNMQKQFRWEPPSNQLL
YPWG*
a.a.
length
InterPro Name
length(83), motif(29:111) 83IPR013164Cadherin, N-terminal [Domain]
length(67), motif(30:96) 67IPR015919Cadherin-like [Domain]
length(83), motif(31:113) 83IPR002126Cadherin [Domain]
length(99), motif(35:133) 99IPR002126Cadherin [Domain]
length(81), motif(51:131) 81IPR002126Cadherin [Domain]
length(20), motif(73:92) 20IPR002126Cadherin [Domain]
length(11), motif(121:131) 11IPR020894Cadherin conserved site [Conserved_site]
length(115), motif(125:239) 115IPR002126Cadherin [Domain]
length(108), motif(127:234) 108IPR015919Cadherin-like [Domain]
length(30), motif(133:162) 30IPR002126Cadherin [Domain]
length(109), motif(134:242) 109IPR002126Cadherin [Domain]
length(93), motif(141:233) 93IPR002126Cadherin [Domain]
length(86), motif(155:240) 86IPR002126Cadherin [Domain]
length(13), motif(207:219) 13IPR002126Cadherin [Domain]
length(20), motif(221:240) 20IPR002126Cadherin [Domain]
length(11), motif(230:240) 11IPR020894Cadherin conserved site [Conserved_site]
length(125), motif(230:354) 125IPR015919Cadherin-like [Domain]
length(14), motif(240:253) 14IPR002126Cadherin [Domain]
length(107), motif(240:346) 107IPR002126Cadherin [Domain]
length(108), motif(243:350) 108IPR002126Cadherin [Domain]
length(94), motif(247:340) 94IPR002126Cadherin [Domain]
length(85), motif(264:348) 85IPR002126Cadherin [Domain]
length(27), motif(298:324) 27IPR002126Cadherin [Domain]
length(18), motif(332:349) 18IPR002126Cadherin [Domain]
length(11), motif(338:348) 11IPR020894Cadherin conserved site [Conserved_site]
length(134), motif(338:471) 134IPR015919Cadherin-like [Domain]
length(110), motif(347:456) 110IPR002126Cadherin [Domain]
length(105), motif(351:455) 105IPR002126Cadherin [Domain]
length(84), motif(358:441) 84IPR002126Cadherin [Domain]
length(82), motif(372:453) 82IPR002126Cadherin [Domain]
length(11), motif(443:453) 11IPR020894Cadherin conserved site [Conserved_site]