H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000394394 Last modified: 27-May-2015
Definition: Similar to Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000394394
Length 320
Codon Adaptation Index (CAI). 0.83
Database links RefSeq NA
UniProt NA
CCDS NA
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000074248
H-Inv cluster ID Locus view HIX0001648
Predicted CDS 169..1131 ; 320[aa] ; Orientation:+1 ;
Genomic location Chromosome 1
Location 1q42.13
CDS position 227170708-227175245
Strand +
Accession number AF218003.1
CAGE tag ID NA
EST ID NA
Clone Number PP265
Experimental resources NBRC: NITE Biological Resource Center NBRC     Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (ADCK3) ;   Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (ADCK3) ;
Length of cDNA 1969[bp] (No. of exon:7)[A:438 T:430 G:574 C:527] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:56997 ;
KEGG GENES KEGG GENES(56997) ;
GeneCard GeneCard ADCK3 ;
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view


Coresponding transcript member (s)
No.1
H-Inv IDTranscript view HIT000074248
H-Inv cluster IDLocus view HIX0001648
Accession numberAF218003.1
CAGE tag IDNA
EST IDNA
Coding potential Help Protein coding
DefinitionSimilar to Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;
Similarity category HelpSimilar to known protein(Category II).
Similar to known protein (Q8NI60) [Identity/coverage = 100.0%/35.39%] to Homo sapiens (Human). protein.
Transcript feature Help NA
Genomic Location G-integra Help Chromosome1
Location1q42.13
CDS position227170708-227175245
Strand+
Gene structure7 exons

Motif information in predicted CDS
ORF

length(321),orf(169:1131)
LPARGRLCPQVQVWPPAGPLACLHQGGRRDHVQQLVKAPPALRGRGLGLQ
PGPRPYPAWGEGGPSAWLGGVCGGGDGVEGLWLGRDLPPLPRDLLKGHPF
FYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLR
ELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIR
AAADRDRETVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFD
FGTQSTTEKIHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARF
PCKAMFEEAYSNYCKRQAQQ*
a.a.
length
InterPro Name
length(93), motif(100:192) 93IPR011009Protein kinase-like domain [Domain]

Protein function information
H-Inv protein ID HIP000394394
Representative H-Inv transcript ID Transcript view HIT000074248
H-Inv cluster ID Locus view HIX0001648
Definition Similar to Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;
Similarity category Help Similar to known protein(Category II).
Similar to known protein (Q8NI60) [Identity/coverage = 100.0%/35.39%] to Homo sapiens (Human). protein.
Gene family/group H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
EC number EC 2.7.11.- Protein-serine/threonine kinases
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
UniProt NA
CCDS NA
Gene symbol/name HGNC symbol ADCK3
HGNC aliases "chaperone-ABC1 (activity of bc1 complex, S.pombe)-like", "chaperone, ABC1 activity of bc1 complex like (S. pombe)", "chaperone, ABC1 activity of bc1 complex homolog (S. pombe)";
HGNC name aarF domain containing kinase 3;
Related H-InvDB links G-integraG-integra ; PPI viewer PPI view ; TACT TACT ;

Glycosylation
GPDB (GlycoProtDB)
GPDB
ID NA
Protein name NA
Organism NA
Length(aa) NA

Subcellular localization information
WoLF PSORT cytosol;
Target P Not predicted
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Translation polymorphism (SNP) and microsatellite (STR) information

Single Nucleotide Polymorphism (SNP) and indel VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
194..194 C/T rs151292389 + CDS Nonsynonymous[Pro9Leu]
199..199 G/A rs202227926 + CDS Nonsynonymous[Val11Ile]
220..220 G/A rs185185707 + CDS Nonsynonymous[Gly18Arg]
234..234 T/- rs3215919 + CDS
240..240 C/A rs200965287 + CDS Nonsynonymous[His24Gln]
244..244 G/A rs149505935 + CDS Nonsynonymous[Gly26Arg]
384^385 -/T rs149374145 + CDS
386..386 G/T rs1574184 + CDS Nonsynonymous[Gly73Val]
387^388 -/T rs201300405 + CDS
388..388 G/C/T rs1574185 + CDS
435..435 C/T rs200440257 + CDS Synonymous[Pro89Pro]
445..445 G/A rs147097934 + CDS Nonsynonymous[Asp93Asn]
451..451 C/T rs200375779 + CDS Synonymous[Leu95Leu]
473..473 A/G rs144147839 + CDS Nonsynonymous[Tyr102Cys]
519..519 C/T rs138727410 + CDS Synonymous[Thr117Thr]
565..565 A/G rs149364914 + CDS Nonsynonymous[Ser133Gly]
577..577 C/T rs139900636 + CDS Nonsynonymous[Arg137Trp]
583..583 G/A rs201134290 + CDS Nonsynonymous[Glu139Lys]
596..596 A/G rs200800365 + CDS Nonsynonymous[Asn143Ser]
609..609 G/A rs202132812 + CDS Synonymous[Leu147Leu]
617..617 G/- rs34158214 + CDS
627..627 C/T rs12593 - CDS Synonymous[Phe153Phe]
666..666 C/A rs150918577 + CDS Nonsynonymous[Asn166Lys]
720..720 G/A rs201337210 + CDS Synonymous[Thr184Thr]
721..721 C/T rs149682899 + CDS Nonsynonymous[Arg185Trp]
722..722 G/A rs200115323 + CDS Nonsynonymous[Arg185Gln]
728..728 A/G rs119468008 + CDS Nonsynonymous[Tyr187Cys]
743..743 C/G rs141260985 + CDS Nonsynonymous[Thr192Ser]
754..754 A/G rs147730489 + CDS Nonsynonymous[Ile196Val]
778..778 G/A rs200930703 + CDS Nonsynonymous[Asp204Asn]
792..792 G/C rs201158713 + CDS Nonsynonymous[Glu208Asp]
793..793 A/G rs200403220 + CDS Nonsynonymous[Thr209Ala]
797..797 T/G rs199724504 + CDS Nonsynonymous[Val210Gly]
799..799 C/T rs201331131 + CDS Nonsynonymous[Arg211Trp]
804..804 G/A rs142600066 + CDS Synonymous[Ala212Ala]
831..831 C/T rs141423403 + CDS Synonymous[Thr221Thr]
832..832 G/A rs119468009 + CDS Nonsynonymous[Gly222Ser]
838..838 G/A rs119468004 + CDS Nonsynonymous[Glu224Lys]
852..852 G/A rs199874519 + CDS Nonsynonymous[Met228Ile]
859..859 G/A rs142894121 + CDS Nonsynonymous[Ala231Thr]
864..864 C/G rs200963031 + CDS Nonsynonymous[His232Gln]
897..897 C/T rs139305619 + CDS Synonymous[Phe243Phe]
903..903 T/C rs3738725 + CDS Synonymous[Ser245Ser]
907..907 G/A rs202058665 + CDS Nonsynonymous[Glu247Lys]
926..926 C/T rs199581236 + CDS Nonsynonymous[Thr253Ile]
939..939 C/T rs201865243 + CDS Synonymous[Thr257Thr]
942..942 G/C rs201171077 + CDS Nonsynonymous[Glu258Asp]
944..944 A/G rs113308613 + CDS Nonsynonymous[Lys259Arg]
952..952 A/C rs142051104 + CDS Nonsynonymous[Asn262His]
963..963 C/T rs7545723 + CDS Synonymous[Pro265Pro]
984..984 C/T rs139551241 + CDS Synonymous[Leu272Leu]
987..987 C/G rs74589348 + CDS Synonymous[Val273Val]
992..992 C/A/G rs61995958 + CDS
1003..1003 A/C rs143650593 + CDS Nonsynonymous[Thr279Pro]
1008..1008 C/T rs201618750 + CDS Synonymous[Tyr280Tyr]
1011..1011 C/T rs141270350 + CDS Synonymous[Ser281Ser]
1053..1053 G/A rs191944347 + CDS Synonymous[Lys295Lys]
1063..1063 C/T rs141725964 + CDS Nonsynonymous[Arg299Cys]
1086..1086 C/T rs150569155 + CDS Synonymous[Phe306Phe]
1087..1087 G/A rs149335528 + CDS Nonsynonymous[Glu307Lys]
1101..1101 C/T rs56043893 + CDS Synonymous[Ser311Ser]
Microsatellite (Short Tandem Repeat, STR)
LocationVariationStrand
No data available
Related H-InvDB links
VaryGeneVaryGene ;