H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000437845 Last modified: 27-May-2015
Definition: Conserved hypothetical protein.
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000437845
Length 56
Codon Adaptation Index (CAI). 0.75
Database links RefSeq NA
UniProt NA
CCDS NA
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000004651
H-Inv cluster ID Locus view HIX0016115
Predicted CDS 356..526 ; 56[aa] ; Orientation:+2 ;
Genomic location Chromosome 21
Location 21q22.2
CDS position 40568058-40571409
Strand -
Accession number AK002177.1
CAGE tag ID NA
EST ID NA
Clone Number PLACE1010148
Experimental resources NBRC: NITE Biological Resource Center NBRC      
Length of cDNA 2005[bp] (No. of exon:2)[A:736 T:490 G:451 C:328] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:54014 ;
KEGG GENES KEGG GENES(54014) ;
GeneCard GeneCard NA
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view


Coresponding transcript member (s)
No.1
H-Inv IDTranscript view HIT000004651
H-Inv cluster IDLocus view HIX0016115
Accession numberAK002177.1
CAGE tag IDNA
EST IDNA
Coding potential Help Protein coding
DefinitionConserved hypothetical protein.
Similarity category HelpConserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Transcript feature Help NA
Genomic Location G-integra Help Chromosome21
Location21q22.2
CDS position40568058-40571409
Strand-
Gene structure2 exons

Protein function information
H-Inv protein ID HIP000437845
Representative H-Inv transcript ID Transcript view HIT000004651
H-Inv cluster ID Locus view HIX0016115
Definition Conserved hypothetical protein.
Similarity category Help Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene family/group H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
EC number NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
UniProt NA
CCDS NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Related H-InvDB links G-integraG-integra ; PPI viewer PPI view ; TACT TACT ;

Glycosylation
GPDB (GlycoProtDB)
GPDB
ID NA
Protein name NA
Organism NA
Length(aa) NA

Subcellular localization information
WoLF PSORT mitochondria;
Target P Not predicted
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Translation polymorphism (SNP) and microsatellite (STR) information

Single Nucleotide Polymorphism (SNP) and indel VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
391..391 C/T rs202178838 - CDS Synonymous[Ala12Ala]
412..412 C/T rs146953324 - CDS Synonymous[Asn19Asn]
447..447 T/C rs117580155 - CDS Nonsynonymous[Leu31Pro]
451..451 C/T rs186057504 - CDS Synonymous[Asn32Asn]
498..498 G/A rs141349834 - CDS Nonsynonymous[Arg48Gln]
520..520 A/G rs113760569 - CDS Synonymous[Arg55Arg]
521^522 -/T rs72220850 - CDS
523^524 -/T rs72451078 - CDS
Microsatellite (Short Tandem Repeat, STR)
LocationVariationStrand
No data available
Related H-InvDB links
VaryGeneVaryGene ;