H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0002273 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
 
 

 
TOP 1-10 11-15 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000255549
Accession number AY572488.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O75643)  [Identity/coverage = 99.953%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940470- 96971253
Strand -
Gene structure 45 exons
 
TOP 1-10 11-15 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000000513
Accession number AB018331.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 100.0%/94.85%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940077- 96968947
Strand -
Gene structure 43 exons
 
TOP 1-10 11-15 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000007665
Accession number AK024391.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.786%/87.69%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940475- 96964647
Strand -
Gene structure 39 exons
 
TOP 1-10 11-15 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000007114
Accession number AK023840.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.351%/86.61%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940470- 96964578
Strand -
Gene structure 39 exons
 
TOP 1-10 11-15 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000026906
Accession number AL831994.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.658%/82.02%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940469- 96963425
Strand -
Gene structure 36 exons
 
TOP 1-10 11-15 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000015538
Accession number AK090671.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 100.0%/26.22%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940470- 96971284
Strand -
Gene structure 15 exons
 
TOP 1-10 11-15 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000009936
Accession number AK026662.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.819%/25.94%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940474- 96949099
Strand -
Gene structure 12 exons
 
TOP 1-10 11-15 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000386675
Accession number BC112891.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 100.0%/88.34%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940474- 96964687
Strand -
Gene structure 39 exons
 
TOP 1-10 11-15 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000262102
Accession number BC065924.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.89%/85.25%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940474- 96964377
Strand -
Gene structure 38 exons
 
TOP 1-10 11-15 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000086850
Accession number BC007577.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 100.0%/61.24%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940474- 96956490
Strand -
Gene structure 27 exons
 
TOP 1-10 11-15 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000498089
Accession number AK303465.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 99.846%/30.48%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940755- 96951114
Strand -
Gene structure 17 exons
 
TOP 1-10 11-15 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000498287
Accession number AK303663.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 93.333%/37.22%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940538- 96951058
Strand -
Gene structure 16 exons
 
TOP 1-10 11-15 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000390685
Accession number BC131784.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9VUV9)  [Identity/coverage = 76.471%/3.17%] to Drosophila melanogaster (Fruit fly). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940284- 96971232
Strand -
Gene structure 15 exons
 
TOP 1-10 11-15 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000066663
Accession number AF085356.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 96.084%/35.67%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940469- 96950461
Strand -
Gene structure 15 exons
 
TOP 1-10 11-15 LAST 
Locus member number 15
H-Inv ID Transcript viewHIT000030395
Accession number BC001417.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O75643)  [Identity/coverage = 100.0%/23.13%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SNRNP200 
HGNC aliases "activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)" 
HGNC name small nuclear ribonucleoprotein 200kDa (U5) 
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q11.2
Position 96940474- 96947651
Strand -
Gene structure 11 exons
Mini-G Locus map Locus map