H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
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Definition*
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---
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H-Inv cluster ID:
HIX0006475
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Vacuolar fusion protein CCZ1 homolog;
Select format
Flat file
XML file
Gene structure
H-Inv cluster ID
HIX0006475
Genomic location
Chromosome
7
Location
7p22.1
Position
6833765- 6865903
Strand
-
Antisense cluster ID(s)
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:51622
;
Entrez Gene ID:221960
;
KEGG GENES
KEGG GENES(51622)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Cluster member H-Inv ID(s)
HIT000390802_04
;
HIT000003467
;
Additional cluster member candidate(s)
NA
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome multiple alignment
;
ORF multiple alignment
;
TOP
1-2
LAST
Cluster member (s)
Locus member number
1
H-Inv ID
HIT000390802_04
Accession number
BC132749.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Vacuolar fusion protein CCZ1 homolog;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
P86791
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
Representative transcript;
Splicing isoform
Genomic location
Chromosome
7
Location
7p22.1
Position
6838830- 6865903
Strand
-
Gene structure
15 exons
TOP
1-2
LAST
Locus member number
2
H-Inv ID
HIT000003467
Accession number
AK000993.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Vacuolar fusion protein CCZ1 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_056437
) [Identity/coverage = 95.455%/22.82%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
Splicing isoform
Genomic location
Chromosome
7
Location
7p22.1
Position
6862353- 6865847
Strand
-
Gene structure
3 exons
Alternative splicing (AS) information
Pattern of alternative splicing isoforms
3' terminal AS; Internal AS;
Position of alternative splicing isoforms
Cassette; Internal acceptor site; Retained intron;
Alternative splicing isoform H-Inv ID(s)
HIT000003467
;
HIT000390802_04
;
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome multiple alignment
;
ORF multiple alignment
;
Gene function information
H-Inv cluster ID
HIX0006475
Representative H-Inv ID
HIT000390802_04
Accession number
BC132749.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Vacuolar fusion protein CCZ1 homolog;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
P86791
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000021187
No. of interaction
6
Interaction partner(s)
HIP000041304
;
HIP000067781
;
HIP000080560
;
HIP000106438
;
HIP000107515
;
HIP000107515
;
BIND
NA
DIP
NA
MINT
MINT-7947479;
HPRD
04184; 06022;
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:51622
;
Entrez Gene ID:221960
;
KEGG GENES
KEGG GENES(51622)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Related H-InvDB links
G-integra
;
PPI view
;
H-DBAS
;
Gene family;
Similarity search tool
;
TACT
;