H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0006475 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Vacuolar fusion protein CCZ1 homolog;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0006475
Genomic location  G-integra Help Chromosome 7
Location 7p22.1
Position 6833765- 6865903
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:51622Entrez Gene ID:221960
KEGG GENES KEGG GENES(51622)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000390802_04HIT000003467
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-2 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000390802_04
Accession number BC132749.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Vacuolar fusion protein CCZ1 homolog;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P86791)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7p22.1
Position 6838830- 6865903
Strand -
Gene structure 15 exons
 
TOP 1-2 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000003467
Accession number AK000993.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Vacuolar fusion protein CCZ1 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_056437)  [Identity/coverage = 95.455%/22.82%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7p22.1
Position 6862353- 6865847
Strand -
Gene structure 3 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000003467Splicing isoformHIT000390802_04
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0006475
Representative H-Inv ID Representative H-Inv IDHIT000390802_04
Accession number BC132749.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Vacuolar fusion protein CCZ1 homolog;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P86791)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000021187
No. of interaction 6
Interaction partner(s) HIP000041304HIP000067781HIP000080560HIP000106438HIP000107515HIP000107515
BIND NA
DIP NA
MINT MINT-7947479; 
HPRD 04184;  06022; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:51622Entrez Gene ID:221960
KEGG GENES KEGG GENES(51622)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT