H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0006940 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0006940
Genomic location  G-integra Help Chromosome 7
Location 7q22.1
Position 100663353- 100702140
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:140453
KEGG GENES KEGG GENES(140453)
GeneCard GeneCardMUC17*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000249194HIT000009678HIT000249195HIT000079529HIT000388907HIT000062405HIT000062404HIT000467087_03
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-8 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000249194
Accession number AJ606307.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q685J3)  [Identity/coverage = 99.933%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100663364- 100702020
Strand +
Gene structure 13 exons
 
TOP 1-8 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000009678
Accession number AK026404.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 99.591%/16.34%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100685974- 100702020
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000249195
Accession number AJ606308.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 99.932%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100663364- 100702020
Strand +
Gene structure 12 exons
 
TOP 1-8 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000079529
Accession number AF430017.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 53.258%/7.86%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100685088- 100702020
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000388907
Accession number BC126315.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 64.966%/6.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100684503- 100701379
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000062405
Accession number AF016694.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 71.171%/2.47%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100677703- 100680561
Strand +
Gene structure 2 exons
 
TOP 1-8 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000062404
Accession number AF016693.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q685J3)  [Identity/coverage = 71.304%/2.56%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100678735- 100679443
Strand +
Gene structure 1 exons
 
TOP 1-8 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000467087_03
Accession number DQ600556.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q22.1
Position 100677571- 100677600
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms Internal AS; 
Position of alternative splicing isoforms Cassette; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000249194Splicing isoformHIT000249195
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0006940
Representative H-Inv ID Representative H-Inv IDHIT000249194
Accession number AJ606307.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Mucin-17; MUC-17; Small intestinal mucin-3; MUC-3; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q685J3)  [Identity/coverage = 99.933%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol MUC17 
HGNC aliases NA
HGNC name mucin 17, cell surface associated 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000086268
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:140453
KEGG GENES KEGG GENES(140453)
GeneCard GeneCardMUC17*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsC010402;  AGhsC010602;  AGhsC010702; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 232321_at;  232407_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 232321_at;  232407_at; 
HG-U133_Plus_2 232321_at;  232407_at; 
HG-U95 70048_at;  70050_at; 
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E 70048_at;  70050_at; 
HG-U95Av2 NA
HuEx-1_0 3016071;  3016073;  3016074;  3016075;  3016077;  3016079;  3016080;  3016081;  3016082;  3016083;  3016084;  3016085;  3016087;  3016088;  3016089;  3016090;  3016091;  3016092; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 A_23_P306610;  A_24_P169507;  A_24_P247643;  A_24_P358875; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator