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H-Inv cluster ID: HIX0007811 Created date: 26-Mar-2013 Last modified: 27-May-2015 Definition: KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;

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Gene structure

H-Inv cluster ID		HIX0007811
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136469700- 136668965
	Strand	+
Antisense cluster ID(s)		NA
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:10656;
	KEGG GENES	KEGG GENES(10656);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000064255;  HIT000041629;  HIT000054451;  HIT000065665;  HIT000263093;  HIT000064256;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

 

TOP 1-6 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000064255
Accession number		AF051321.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (O75525)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Representative transcript;  Splicing isoform
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136469716- 136659853
	Strand	+
Gene structure		9 exons

 

TOP 1-6 LAST

Locus member number		2
H-Inv ID		HIT000041629
Accession number		BC032606.2
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (O75525)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136469708- 136659489
	Strand	+
Gene structure		9 exons

 

TOP 1-6 LAST

Locus member number		3
H-Inv ID		HIT000054451
Accession number		BX537666.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (O75525)  [Identity/coverage = 95.745%/27.17%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Splicing isoform
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136550777- 136562216
	Strand	+
Gene structure		2 exons

 

TOP 1-6 LAST

Locus member number		4
H-Inv ID		HIT000065665
Accession number		AF069681.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (O75525)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136469760- 136659493
	Strand	+
Gene structure		9 exons

 

TOP 1-6 LAST

Locus member number		5
H-Inv ID		HIT000263093
Accession number		BC068536.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (O75525)  [Identity/coverage = 99.711%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Splicing isoform
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136469702- 136659851
	Strand	+
Gene structure		10 exons

 

TOP 1-6 LAST

Locus member number		6
H-Inv ID		HIT000064256
Accession number		AF051322.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (O75525)  [Identity/coverage = 99.678%/97.98%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	8
	Location	8q24.23
	Position	136470131- 136659489
	Strand	+
Gene structure		8 exons

Alternative splicing (AS) information

Pattern of alternative splicing isoforms	5' terminal AS;  3' terminal AS;  Internal AS;
Position of alternative splicing isoforms	Retained intron;
Alternative splicing isoform H-Inv ID(s)	HIT000064255;  HIT000263093;  HIT000054451;
Related H-InvDB links	H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

Gene function information

H-Inv cluster ID		HIX0007811
Representative H-Inv ID		HIT000064255
Accession number		AF051321.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		KH domain-containing, RNA-binding, signal transduction-associated protein 3; RNA-binding protein T-Star; Sam68-like mammalian protein 2; SLM-2; Sam68-like phosphotyrosine protein;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (O75525)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000045606
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:10656;
	KEGG GENES	KEGG GENES(10656);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Gene family;  Similarity search tool;  TACT;

Gene expression information

Last modified:27-May-2015

Tissue-specific expression			NA
Probe information	AceGene		AGhsB020320;
	Affymetrix GeneChip	HG-Focus	209781_s_at;
		HG-U133	209781_s_at;
		HG-U133A	209781_s_at;
		HG-U133A_2	209781_s_at;
		HG-U133B	NA
		HG-U133_Plus_2	209781_s_at;
		HG-U95	31786_at;
		HG-U95A	31786_at;
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	3117385;  3117386;  3117387;  3117388;  3117399;  3117400;  3117403;  3117404;  3117406;  3117412;  3117420;  3117431;  3117432;  3117433;  3117434;  3117435;  3117436;  3155043;  3155047;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P257335;
		Whole Human Genome Oligo Microarray:PGID247	A_23_P257335;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;