H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0008709 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Sickle tail protein homolog isoform 1.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0008709
Genomic location  G-integra Help Chromosome 10
Location 10p12.1-10p12.2
Position 23983675- 24836777
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:56243
KEGG GENES KEGG GENES(56243)
GeneCard GeneCardKIAA1217*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000028192HIT000000933HIT000055344HIT000038446HIT000057098HIT000016009HIT000021301HIT000026107HIT000500536HIT000502655HIT000409130HIT000495046HIT000336028HIT000498529
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-14 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000028192
Accession number AL833280.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_062536)  [Identity/coverage = 99.794%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24498093- 24836603
Strand +
Gene structure 21 exons
 
TOP 1-10 11-14 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000000933
Accession number AB033043.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 23983675- 24836777
Strand +
Gene structure 19 exons
 
TOP 1-10 11-14 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000055344
Accession number BX640796.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_062536)  [Identity/coverage = 99.754%/85.54%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24755460- 24836772
Strand +
Gene structure 15 exons
 
TOP 1-10 11-14 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000038446
Accession number BC018764.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 99.195%/71.6%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24738594- 24834197
Strand +
Gene structure 14 exons
 
TOP 1-10 11-14 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000057098
Accession number BX648451.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 99.611%/84.1%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24755460- 24836417
Strand +
Gene structure 13 exons
 
TOP 1-10 11-14 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000016009
Accession number AK091142.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091971)  [Identity/coverage = 99.678%/71.28%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24497720- 24813693
Strand +
Gene structure 12 exons
 
TOP 1-10 11-14 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000021301
Accession number AK096446.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 99.877%/67.33%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24528124- 24813693
Strand +
Gene structure 11 exons
 
TOP 1-10 11-14 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000026107
Accession number AL157473.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 100.0%/33.23%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24813567- 24836772
Strand +
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000500536
Accession number BC136521.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091971)  [Identity/coverage = 99.924%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24498102- 24836627
Strand +
Gene structure 19 exons
 
TOP 1-10 11-14 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000502655
Accession number BC144227.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091971)  [Identity/coverage = 99.847%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24498102- 24836627
Strand +
Gene structure 18 exons
 
TOP 1-10 11-14 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000409130
Accession number AB291616.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091971)  [Identity/coverage = 100.0%/98.17%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24508555- 24836777
Strand +
Gene structure 17 exons
 
TOP 1-10 11-14 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000495046
Accession number AK300422.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_062536)  [Identity/coverage = 99.804%/85.54%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24755449- 24835412
Strand +
Gene structure 16 exons
 
TOP 1-10 11-14 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000336028
Accession number BC098577.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091970)  [Identity/coverage = 99.768%/71.04%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24755480- 24834245
Strand +
Gene structure 12 exons
 
TOP 1-10 11-14 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000498529
Accession number AK303905.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001091971)  [Identity/coverage = 99.478%/43.93%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10p12.1-10p12.2
Position 24544257- 24820821
Strand +
Gene structure 10 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000500536Splicing isoformHIT000057098Splicing isoformHIT000028192Splicing isoformHIT000000933Splicing isoformHIT000502655Splicing isoformHIT000055344Splicing isoformHIT000038446Splicing isoformHIT000336028Splicing isoformHIT000495046
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0008709
Representative H-Inv ID Representative H-Inv IDHIT000028192
Accession number AL833280.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Sickle tail protein homolog isoform 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_062536)  [Identity/coverage = 99.794%/100.0%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol KIAA1217 
HGNC aliases NA
HGNC name KIAA1217 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000045690
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:56243
KEGG GENES KEGG GENES(56243)
GeneCard GeneCardKIAA1217*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsB210717; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 231807_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 231807_at; 
HG-U133_Plus_2 1554438_at;  1560115_a_at;  1562966_at;  231807_at; 
HG-U95 56739_at;  62576_at;  74697_at;  83967_at;  90531_at; 
HG-U95A NA
HG-U95B 56739_at; 
HG-U95C 62576_at; 
HG-U95D NA
HG-U95E 74697_at;  83967_at;  90531_at; 
HG-U95Av2 NA
HuEx-1_0 3238993;  3238994;  3238997;  3239054;  3239055;  3239075;  3239076;  3239093;  3239094;  3239109;  3239110;  3239112;  3239116;  3239129;  3239130;  3239136;  3239140;  3239142;  3239143;  3239145;  3239146;  3239149;  3239150;  3239155;  3239168;  3239169;  3239170;  3239171;  3239172;  3239173;  3239174;  3239175;  3239177;  3239180;  3239181;  3239182;  3239183;  3239184;  3239185;  3281620; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 A_23_P310022;  A_32_P225092; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator