H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0009089 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0009089
Genomic location  G-integra Help Chromosome 10
Location 10q24.1
Position 99185917- 99193198
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5223
KEGG GENES KEGG GENES(5223)
GeneCard GeneCardPGAM1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000034757HIT000035367HIT000262379HIT000191250HIT000083056HIT000259257HIT000264973HIT000503428HIT000425013HIT000425820HIT000431217HIT000268532HIT000492115HIT000490615HIT000029640HIT000260304HIT000330876HIT000268616HIT000499523HIT000491243HIT000465649_06
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-20 21-21 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000034757
Accession number BC010038.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186027- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000035367
Accession number BC011678.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186063- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000262379
Accession number BC066959.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186016- 99193177
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000191250
Accession number J04173.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186040- 99193197
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000083056
Accession number AY007118.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186045- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000259257
Accession number BC053356.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186046- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000264973
Accession number BC073742.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186048- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000503428
Accession number BC157873.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186030- 99193120
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000425013
Accession number AK292216.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99185981- 99192907
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000425820
Accession number AK293023.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186037- 99192708
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000431217
Accession number AK312351.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186053- 99192281
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000268532
Accession number CR541659.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186065- 99192278
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000492115
Accession number AK297491.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P18669)  [Identity/coverage = 98.701%/60.63%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186012- 99193089
Strand +
Gene structure 5 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000490615
Accession number AK295991.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P18669)  [Identity/coverage = 99.535%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186030- 99192982
Strand +
Gene structure 5 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 15
H-Inv ID Transcript viewHIT000029640
Accession number BC000455.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186027- 99193198
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 16
H-Inv ID Transcript viewHIT000260304
Accession number BC062302.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186047- 99193195
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 17
H-Inv ID Transcript viewHIT000330876
Accession number AK223096.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186036- 99193183
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 18
H-Inv ID Transcript viewHIT000268616
Accession number CR541744.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99186065- 99192281
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 19
H-Inv ID Transcript viewHIT000499523
Accession number AK315910.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P18669)  [Identity/coverage = 94.091%/86.61%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99187431- 99193197
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 20
H-Inv ID Transcript viewHIT000491243
Accession number AK296619.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P18669)  [Identity/coverage = 94.091%/86.61%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99187575- 99192547
Strand +
Gene structure 4 exons
 
TOP 1-10 11-20 21-21 LAST 
Locus member number 21
H-Inv ID Transcript viewHIT000465649_06
Accession number DQ599118.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.1
Position 99190280- 99190310
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000034757Splicing isoformHIT000491243Splicing isoformHIT000490615Splicing isoformHIT000492115
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0009089
Representative H-Inv ID Representative H-Inv IDHIT000034757
Accession number BC010038.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Phosphoglycerate mutase 1; EC=3.1.3.13; EC=5.4.2.1; EC=5.4.2.4; BPG-dependent PGAM 1; Phosphoglycerate mutase isozyme B; PGAM-B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P18669)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol PGAM1 
HGNC aliases NA
HGNC name phosphoglycerate mutase 1 (brain) 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000024198
No. of interaction 30
Interaction partner(s) HIP000022125HIP000026282HIP000026464HIP000029491HIP000033142HIP000033479HIP000035815HIP000042614HIP000048007HIP000048202HIP000048747HIP000048747HIP000050160HIP000066274HIP000067686HIP000068244HIP000079317HIP000079317HIP000089587HIP000091191HIP000100966HIP000100966HIP000107422HIP000107851HIP000115648HIP000123857HIP000146077HIP000183098HIP000255648
BIND NA
DIP 179998E; 
MINT MINT-3318976;  MINT-63791;  MINT-64172;  MINT-64341;  MINT-7995158;  MINT-7995166; 
HPRD 01071;  01456;  02842;  03183;  05043;  07206;  09113; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5223
KEGG GENES KEGG GENES(5223)
GeneCard GeneCardPGAM1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus 200886_s_at; 
HG-U133 200886_s_at; 
HG-U133A 200886_s_at; 
HG-U133A_2 200886_s_at; 
HG-U133B NA
HG-U133_Plus_2 200886_s_at; 
HG-U95 41221_at; 
HG-U95A 41221_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3465914; 
HuGeneFL J04173_at; 
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 A_32_P45738; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator