H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0009176 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0009176
Genomic location  G-integra Help Chromosome 10
Location 10q24.33
Position 105156383- 105206049
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:22984
KEGG GENES KEGG GENES(22984)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000042322HIT000099088HIT000261406HIT000265829HIT000339854HIT000489595HIT000090816HIT000488396HIT000426284HIT000086890HIT000083062
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-11 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000042322
Accession number D80007.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q14690)  [Identity/coverage = 99.947%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156459- 105205473
Strand +
Gene structure 36 exons
 
TOP 1-10 11-11 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000099088
Accession number BC049838.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.652%/76.75%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156411- 105200189
Strand +
Gene structure 29 exons
 
TOP 1-10 11-11 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000261406
Accession number BC064486.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.442%/76.64%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156419- 105200184
Strand +
Gene structure 29 exons
 
TOP 1-10 11-11 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000265829
Accession number BC080560.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.442%/76.64%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156419- 105200184
Strand +
Gene structure 29 exons
 
TOP 1-10 11-11 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000339854
Accession number BC111040.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.654%/77.18%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156457- 105200217
Strand +
Gene structure 29 exons
 
TOP 1-10 11-11 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000489595
Accession number AK294971.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 91.837%/5.34%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156383- 105201988
Strand +
Gene structure 25 exons
 
TOP 1-10 11-11 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000090816
Accession number BC023615.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.902%/54.52%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105174798- 105200339
Strand +
Gene structure 18 exons
 
TOP 1-10 11-11 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000488396
Accession number AK293772.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 94.821%/43.35%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156383- 105179465
Strand +
Gene structure 16 exons
 
TOP 1-10 11-11 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000426284
Accession number AK307418.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog; Apoptosis-linked gene 4 protein; Programmed cell death protein 11;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q6NS46)  [Identity/coverage = 83.902%/33.03%] to Mus musculus (Mouse). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105156400- 105177631
Strand +
Gene structure 14 exons
 
TOP 1-10 11-11 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000086890
Accession number BC007698.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 99.095%/35.44%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105181150- 105200184
Strand +
Gene structure 13 exons
 
TOP 1-10 11-11 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000083062
Accession number AY007124.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein RRP5 homolog.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_055791)  [Identity/coverage = 100.0%/19.4%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 10
Location 10q24.33
Position 105200570- 105206049
Strand +
Gene structure 7 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0009176
Representative H-Inv ID Representative H-Inv IDHIT000042322
Accession number D80007.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q14690)  [Identity/coverage = 99.947%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000030738
No. of interaction 14
Interaction partner(s) HIP000013156HIP000021401HIP000021401HIP000028809HIP000035609HIP000073185HIP000083506HIP000085373HIP000095593HIP000099536HIP000099536HIP000107116HIP000115133HIP000117036
BIND NA
DIP 112773E; 
MINT MINT-63394; 
HPRD 00471;  01238;  01241;  01818;  13006; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:22984
KEGG GENES KEGG GENES(22984)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsB101003;  AGhsB161316;  AGhsB211509; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 212422_at; 
HG-U133A 212422_at; 
HG-U133A_2 212422_at; 
HG-U133B NA
HG-U133_Plus_2 212422_at; 
HG-U95 34731_at; 
HG-U95A 34731_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3262201;  3262202;  3262204;  3262205;  3262207;  3262208;  3262209;  3262210;  3262211;  3262212;  3262213;  3262214;  3262215;  3262216;  3262217;  3262218;  3262220;  3262221;  3262223;  3262224;  3262225;  3262228;  3262230;  3262231;  3262232;  3262233;  3262235;  3262236;  3262237;  3262238;  3262239;  3262240;  3262241;  3262242;  3262244;  3262246;  3262247;  3262248;  3262250;  3262251;  3262252;  3262253;  3304760;  3304762;  3304763;  3304764; 
HuGeneFL D80007_at; 
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 A_24_P145087; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator