H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
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Definition*
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---
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H-Inv cluster ID:
HIX0009176
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
Select format
Flat file
XML file
Gene structure
H-Inv cluster ID
HIX0009176
Genomic location
Chromosome
10
Location
10q24.33
Position
105156383- 105206049
Strand
+
Antisense cluster ID(s)
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:22984
;
KEGG GENES
KEGG GENES(22984)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Cluster member H-Inv ID(s)
HIT000042322
;
HIT000099088
;
HIT000261406
;
HIT000265829
;
HIT000339854
;
HIT000489595
;
HIT000090816
;
HIT000488396
;
HIT000426284
;
HIT000086890
;
HIT000083062
;
Additional cluster member candidate(s)
NA
Related H-InvDB links
H-DBAS;
G-integra
;
cDNA-genome multiple alignment
;
ORF multiple alignment
;
TOP
1-10
11-11
LAST
Cluster member (s)
Locus member number
1
H-Inv ID
HIT000042322
Accession number
D80007.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
Q14690
) [Identity/coverage = 99.947%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
Representative transcript;
Genomic location
Chromosome
10
Location
10q24.33
Position
105156459- 105205473
Strand
+
Gene structure
36 exons
TOP
1-10
11-11
LAST
Locus member number
2
H-Inv ID
HIT000099088
Accession number
BC049838.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.652%/76.75%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156411- 105200189
Strand
+
Gene structure
29 exons
TOP
1-10
11-11
LAST
Locus member number
3
H-Inv ID
HIT000261406
Accession number
BC064486.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.442%/76.64%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156419- 105200184
Strand
+
Gene structure
29 exons
TOP
1-10
11-11
LAST
Locus member number
4
H-Inv ID
HIT000265829
Accession number
BC080560.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.442%/76.64%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156419- 105200184
Strand
+
Gene structure
29 exons
TOP
1-10
11-11
LAST
Locus member number
5
H-Inv ID
HIT000339854
Accession number
BC111040.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.654%/77.18%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156457- 105200217
Strand
+
Gene structure
29 exons
TOP
1-10
11-11
LAST
Locus member number
6
H-Inv ID
HIT000489595
Accession number
AK294971.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 91.837%/5.34%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156383- 105201988
Strand
+
Gene structure
25 exons
TOP
1-10
11-11
LAST
Locus member number
7
H-Inv ID
HIT000090816
Accession number
BC023615.2
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.902%/54.52%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105174798- 105200339
Strand
+
Gene structure
18 exons
TOP
1-10
11-11
LAST
Locus member number
8
H-Inv ID
HIT000488396
Accession number
AK293772.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 94.821%/43.35%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156383- 105179465
Strand
+
Gene structure
16 exons
TOP
1-10
11-11
LAST
Locus member number
9
H-Inv ID
HIT000426284
Accession number
AK307418.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog; Apoptosis-linked gene 4 protein; Programmed cell death protein 11;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q6NS46
) [Identity/coverage = 83.902%/33.03%] to Mus musculus (Mouse). protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105156400- 105177631
Strand
+
Gene structure
14 exons
TOP
1-10
11-11
LAST
Locus member number
10
H-Inv ID
HIT000086890
Accession number
BC007698.2
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 99.095%/35.44%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105181150- 105200184
Strand
+
Gene structure
13 exons
TOP
1-10
11-11
LAST
Locus member number
11
H-Inv ID
HIT000083062
Accession number
AY007124.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to Protein RRP5 homolog.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_055791
) [Identity/coverage = 100.0%/19.4%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Transcript feature
NA
Genomic location
Chromosome
10
Location
10q24.33
Position
105200570- 105206049
Strand
+
Gene structure
7 exons
Gene function information
H-Inv cluster ID
HIX0009176
Representative H-Inv ID
HIT000042322
Accession number
D80007.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Protein RRP5 homolog; NF-kappa-B-binding protein; NFBP; Programmed cell death protein 11;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
Q14690
) [Identity/coverage = 99.947%/100.0%] to Homo sapiens (Human). protein.
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000030738
No. of interaction
14
Interaction partner(s)
HIP000013156
;
HIP000021401
;
HIP000021401
;
HIP000028809
;
HIP000035609
;
HIP000073185
;
HIP000083506
;
HIP000085373
;
HIP000095593
;
HIP000099536
;
HIP000099536
;
HIP000107116
;
HIP000115133
;
HIP000117036
;
BIND
NA
DIP
112773E;
MINT
MINT-63394;
HPRD
00471; 01238; 01241; 01818; 13006;
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:22984
;
KEGG GENES
KEGG GENES(22984)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Related H-InvDB links
G-integra
;
PPI view
;
H-DBAS;
Gene family;
Similarity search tool
;
TACT
;
Gene expression information
Last modified:27-May-2015
Tissue-specific expression
NA
Probe
information
AceGene
AGhsB101003; AGhsB161316; AGhsB211509;
Affymetrix
GeneChip
HG-Focus
NA
HG-U133
212422_at;
HG-U133A
212422_at;
HG-U133A_2
212422_at;
HG-U133B
NA
HG-U133_Plus_2
212422_at;
HG-U95
34731_at;
HG-U95A
34731_at;
HG-U95B
NA
HG-U95C
NA
HG-U95D
NA
HG-U95E
NA
HG-U95Av2
NA
HuEx-1_0
3262201; 3262202; 3262204; 3262205; 3262207; 3262208; 3262209; 3262210; 3262211; 3262212; 3262213; 3262214; 3262215; 3262216; 3262217; 3262218; 3262220; 3262221; 3262223; 3262224; 3262225; 3262228; 3262230; 3262231; 3262232; 3262233; 3262235; 3262236; 3262237; 3262238; 3262239; 3262240; 3262241; 3262242; 3262244; 3262246; 3262247; 3262248; 3262250; 3262251; 3262252; 3262253; 3304760; 3304762; 3304763; 3304764;
HuGeneFL
D80007_at;
Agilent
Human 1A Oligo Microarray:PGID215
NA
Whole Human Genome Oligo Microarray:PGID247
A_24_P145087;
Related H-InvDB links
H-ANGEL
;
DNAProbeLocator
;