H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0009341 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Acid trehalase-like protein 1.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0009341
Genomic location  G-integra Help Chromosome 11
Location 11p15.5
Position 289135- 296107
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80162
KEGG GENES KEGG GENES(80162)
GeneCard GeneCardATHL1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000262274HIT000014935HIT000009562HIT000339354HIT000339355
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-5 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000262274
Accession number BC066641.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 100.0%/39.48%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 11
Location 11p15.5
Position 289172- 295676
Strand +
Gene structure 13 exons
 
TOP 1-5 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000014935
Accession number AK074155.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 62.733%/14.38%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 11
Location 11p15.5
Position 289135- 295678
Strand +
Gene structure 11 exons
 
TOP 1-5 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000009562
Accession number AK026288.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 97.923%/45.73%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Transcript feature NA
Genomic location  G-integra Chromosome 11
Location 11p15.5
Position 290682- 295676
Strand +
Gene structure 8 exons
 
TOP 1-5 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000339354
Accession number BC109257.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 100.0%/78.02%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Transcript feature NA
Genomic location  G-integra Chromosome 11
Location 11p15.5
Position 290694- 295412
Strand +
Gene structure 11 exons
 
TOP 1-5 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000339355
Accession number BC109258.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 100.0%/78.02%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Transcript feature NA
Genomic location  G-integra Chromosome 11
Location 11p15.5
Position 290694- 295412
Strand +
Gene structure 11 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000014935Splicing isoformHIT000262274
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0009341
Representative H-Inv ID Representative H-Inv IDHIT000262274
Accession number BC066641.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Acid trehalase-like protein 1.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_079368)  [Identity/coverage = 100.0%/39.48%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ATHL1 
HGNC aliases NA
HGNC name ATH1, acid trehalase-like 1 (yeast) 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000077252
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80162
KEGG GENES KEGG GENES(80162)
GeneCard GeneCardATHL1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA060411; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 219359_at; 
HG-U133A 219359_at; 
HG-U133A_2 219359_at; 
HG-U133B NA
HG-U133_Plus_2 219359_at; 
HG-U95 56223_at;  91847_at; 
HG-U95A NA
HG-U95B 56223_at; 
HG-U95C NA
HG-U95D 91847_at; 
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3315614;  3315617;  3315618;  3315619;  3315620;  3315621;  3315622;  3315623;  3315624;  3315628;  3315630;  3315631;  3315633;  3315640;  3315641;  3315642;  3315643;  3315644;  3315645;  3315647;  3315648;  3315649;  3315650;  3315651;  3315652;  3357763;  3357764;  3357765; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P98686; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P98686; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator