H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0011883 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Calmodulin; CaM;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0011883
Genomic location  G-integra Help Chromosome 14
Location 14q32.11
Position 90862846- 90874618
Strand +
Antisense cluster ID(s) HIX0038045 overlap at CDSs (all)
HIX0221642 overlap at CDSs (all)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:801; 
KEGG GENES KEGG GENES(801); 
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000053157;  HIT000035481;  HIT000029639;  HIT000033853;  HIT000033560;  HIT000054462;  HIT000056870;  HIT000195117;  HIT000099738;  HIT000422734;  HIT000250944;  HIT000097366;  HIT000218356; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-10 11-13 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000053157
Accession number BC047523.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863377- 90874396
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000035481
Accession number BC011834.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863376- 90871952
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000029639
Accession number BC000454.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863393- 90871451
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000033853
Accession number BC008597.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863393- 90871451
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000033560
Accession number BC007965.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Calmodulin.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001734)  [Identity/coverage = 100.0%/99.33%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90864606- 90871451
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000054462
Accession number BX537677.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90871276- 90874605
Strand +
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000056870
Accession number BX648223.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90871727- 90874605
Strand +
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000195117
Accession number M27319.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863490- 90871323
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000099738
Accession number BT006818.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90866408- 90871059
Strand +
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000422734
Accession number AK289937.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Calmodulin.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001734)  [Identity/coverage = 99.324%/99.33%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863477- 90871416
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000250944
Accession number AY189287.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Calmodulin.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_005175)  [Identity/coverage = 100.0%/99.33%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90864276- 90871129
Strand +
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000097366
Accession number BC042831.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90873689- 90874609
Strand +
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000218356
Accession number U16851.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, unclassifiable transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 14
Location 14q32.11
Position 90863382- 90863487
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000422734;  Splicing isoformHIT000053157;  Splicing isoformHIT000033560;  Splicing isoformHIT000029639; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0011883
Representative H-Inv ID Representative H-Inv IDHIT000053157
Accession number BC047523.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Calmodulin; CaM;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P62158)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000024994
No. of interaction 151
Interaction partner(s) HIP000021606;  HIP000021999;  HIP000022920;  HIP000023827;  HIP000024080;  HIP000024373;  HIP000024429;  HIP000024433;  HIP000024603;  HIP000024723;  HIP000025001;  HIP000025001;  HIP000025184;  HIP000025256;  HIP000025619;  HIP000025619;  HIP000025817;  HIP000026231;  HIP000026561;  HIP000026650;  HIP000027004;  HIP000028648;  HIP000028806;  HIP000028948;  HIP000029106;  HIP000029669;  HIP000029733;  HIP000029919;  HIP000030386;  HIP000030765;  HIP000032098;  HIP000032397;  HIP000032749;  HIP000032846;  HIP000032870;  HIP000033674;  HIP000034651;  HIP000036736;  HIP000036736;  HIP000037607;  HIP000039461;  HIP000040522;  HIP000040680;  HIP000041107;  HIP000041308;  HIP000041429;  HIP000042652;  HIP000044043;  HIP000046719;  HIP000046896;  HIP000047664;  HIP000048107;  HIP000048801;  HIP000049174;  HIP000049915;  HIP000049997;  HIP000050005;  HIP000051355;  HIP000052086;  HIP000052329;  HIP000052586;  HIP000053726;  HIP000054580;  HIP000057472;  HIP000057536;  HIP000058633;  HIP000059613;  HIP000060603;  HIP000060858;  HIP000063272;  HIP000063383;  HIP000064456;  HIP000065273;  HIP000065299;  HIP000067584;  HIP000067617;  HIP000069367;  HIP000069837;  HIP000069887;  HIP000071741;  HIP000072281;  HIP000074095;  HIP000074116;  HIP000074361;  HIP000075478;  HIP000075551;  HIP000075910;  HIP000076060;  HIP000077638;  HIP000079704;  HIP000080465;  HIP000080779;  HIP000082634;  HIP000082747;  HIP000083424;  HIP000084122;  HIP000084148;  HIP000085076;  HIP000085708;  HIP000086514;  HIP000086839;  HIP000086928;  HIP000088283;  HIP000088399;  HIP000091330;  HIP000091500;  HIP000093491;  HIP000094907;  HIP000095322;  HIP000096838;  HIP000096868;  HIP000097117;  HIP000097471;  HIP000098226;  HIP000099275;  HIP000101550;  HIP000101991;  HIP000101991;  HIP000102217;  HIP000102293;  HIP000102581;  HIP000102898;  HIP000104180;  HIP000104327;  HIP000104847;  HIP000105099;  HIP000106041;  HIP000106185;  HIP000107233;  HIP000107622;  HIP000109499;  HIP000110634;  HIP000113005;  HIP000113507;  HIP000116213;  HIP000116715;  HIP000117036;  HIP000128485;  HIP000129551;  HIP000131477;  HIP000136079;  HIP000145170;  HIP000146754;  HIP000148595;  HIP000176829;  HIP000177086;  HIP000200174;  HIP000246810;  HIP000254467;  HIP000254467;  HIP000359409; 
BIND 19092;  200006;  200007;  200008;  200009;  200010;  200012;  200013;  300817;  301726;  58062; 
DIP 102879E;  103745E;  104171E;  112446E;  112851E;  113176E;  114308E;  114414E;  114783E;  114827E;  115144E;  115983E;  116983E;  117513E;  175832E;  177437E;  185610E;  31E;  489E; 
MINT MINT-15764;  MINT-15765;  MINT-15766;  MINT-16955;  MINT-16956;  MINT-16957;  MINT-17793;  MINT-17795;  MINT-3295975;  MINT-48052;  MINT-48084;  MINT-48113;  MINT-48186;  MINT-48261;  MINT-48323;  MINT-48456;  MINT-48550;  MINT-48603;  MINT-48670;  MINT-48738;  MINT-48841;  MINT-48939;  MINT-49007;  MINT-49067;  MINT-49123;  MINT-49173;  MINT-49204;  MINT-49236;  MINT-49274;  MINT-49341;  MINT-49428;  MINT-49484;  MINT-49550;  MINT-49596;  MINT-5114545;  MINT-5114562;  MINT-51633;  MINT-51634;  MINT-51635;  MINT-51636;  MINT-51637;  MINT-51638;  MINT-51639;  MINT-51640;  MINT-51641;  MINT-51642;  MINT-58231;  MINT-58232;  MINT-58233;  MINT-58242;  MINT-58244;  MINT-6175484;  MINT-63955;  MINT-63956;  MINT-6595938;  MINT-6596013;  MINT-67316;  MINT-7148437;  MINT-7297878;  MINT-7899812;  MINT-7988100;  MINT-7988123;  MINT-8200174;  MINT-8200205; 
HPRD 00017;  00019;  00032;  00043;  00045;  00051;  00146;  00239;  00251;  00277;  00279;  00352;  00455;  00559;  00579;  00589;  00592;  00656;  00677;  00679;  00777;  00800;  00828;  00918;  00941;  00942;  00975;  01028;  01038;  01061;  01098;  01142;  01166;  01167;  01168;  01169;  01198;  01203;  01224;  01227;  01235;  01238;  01239;  01241;  01281;  01286;  01346;  01347;  01387;  01404;  01422;  01442;  01476;  01491;  01498;  01535;  01536;  01540;  01549;  01550;  01585;  01615;  01618;  01628;  01684;  01710;  01787;  01790;  01817;  01818;  01843;  01852;  01855;  01861;  01862;  01863;  01890;  02043;  02177;  02274;  02367;  02429;  02437;  02484;  02524;  02543;  02577;  02795;  02811;  02884;  02917;  02963;  02985;  03007;  03009;  03015;  03070;  03072;  03183;  03195;  03276;  03283;  03311;  03378;  03390;  03428;  03465;  03533;  03538;  03648;  03677;  03757;  03771;  03780;  03828;  03833;  03914;  03929;  03947;  03965;  04009;  04043;  04045;  04130;  04172;  04235;  04274;  04300;  04462;  04541;  04585;  04713;  04728;  04921;  04978;  04979;  04980;  05059;  05125;  05230;  05255;  05270;  05322;  05327;  05353;  05412;  05442;  05457;  05667;  05803;  05804;  05890;  05934;  05982;  06060;  06120;  06467;  06532;  06692;  06763;  06886;  07505;  07519;  08014;  08356;  08555;  08599;  08830;  08922;  08946;  09073;  09077;  09235;  09253;  09315;  09323;  10040;  10369;  10406;  10515;  10551;  10848;  11049;  11366;  11474;  11476;  11613;  11792;  11871;  13000;  13882;  14727;  14746;  15253;  15302;  15926;  15999;  16241;  17279;  17627;  18124;  18125;  18206;  19599; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:801; 
KEGG GENES KEGG GENES(801); 
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool;  TACTTACT; 
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene NA
Affymetrix
GeneChip		 HG-Focus 200655_s_at; 
HG-U133 200653_s_at;  200655_s_at;  209563_x_at;  213688_at; 
HG-U133A 200653_s_at;  200655_s_at;  209563_x_at;  213688_at; 
HG-U133A_2 200653_s_at;  200655_s_at;  209563_x_at;  213688_at; 
HG-U133B NA
HG-U133_Plus_2 200653_s_at;  200655_s_at;  209563_x_at;  213688_at; 
HG-U95 41143_at;  955_at; 
HG-U95A 41143_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3051591;  3548351;  3548352;  3548360;  3548362;  3548363;  3548366;  3548368;  3548371;  3548372;  3548374;  3548375;  3576080;  3576081;  3576083;  3576084;  3576085;  3983844;  3983845; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P163179; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P163178; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator;