H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0012231 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Histidine decarboxylase; HDC; EC=4.1.1.22;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0012231
Genomic location  G-integra Help Chromosome 15
Location 15q21.2
Position 50534144- 50558223
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3067
KEGG GENES KEGG GENES(3067)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000195937HIT000321884HIT000390317HIT000502603HIT000429345
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-5 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000195937
Accession number M60445.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P19113)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 15
Location 15q21.2
Position 50534144- 50557871
Strand -
Gene structure 12 exons
 
TOP 1-5 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000321884
Accession number X54297.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P19113)  [Identity/coverage = 99.849%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 15
Location 15q21.2
Position 50534151- 50557922
Strand -
Gene structure 12 exons
 
TOP 1-5 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000390317
Accession number BC130527.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P19113)  [Identity/coverage = 99.849%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 15
Location 15q21.2
Position 50534217- 50557863
Strand -
Gene structure 12 exons
 
TOP 1-5 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000502603
Accession number BC144173.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P19113)  [Identity/coverage = 99.841%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 15
Location 15q21.2
Position 50534210- 50557863
Strand -
Gene structure 11 exons
 
TOP 1-5 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000429345
Accession number AK310479.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P19113)  [Identity/coverage = 99.419%/37.92%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 15
Location 15q21.2
Position 50545117- 50557923
Strand -
Gene structure 5 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000195937Splicing isoformHIT000502603Splicing isoformHIT000429345
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0012231
Representative H-Inv ID Representative H-Inv IDHIT000195937
Accession number M60445.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Histidine decarboxylase; HDC; EC=4.1.1.22;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P19113)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000077840
No. of interaction 1
Interaction partner(s) HIP000029955
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3067
KEGG GENES KEGG GENES(3067)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA160814; 
Affymetrix
GeneChip
HG-Focus 207067_s_at; 
HG-U133 207067_s_at; 
HG-U133A 207067_s_at; 
HG-U133A_2 207067_s_at; 
HG-U133B NA
HG-U133_Plus_2 207067_s_at; 
HG-U95 35606_at; 
HG-U95A 35606_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3623656;  3623657;  3623658;  3623659;  3623660;  3623662;  3623667;  3623668;  3623670;  3623671;  3623672;  3623674;  3623676;  3623677;  3623679;  3623680; 
HuGeneFL D16583_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P117662; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P117662; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator