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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0012661 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0012661
Genomic location  G-integra Help Chromosome 16
Location 16p13.3
Position 730115- 732870
Strand +
Antisense cluster ID(s) HIX0038557 overlap at CDSs (pertial)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:10273
KEGG GENES KEGG GENES(10273)
GeneCard GeneCardSTUB1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000079607HIT000037856HIT000033289HIT000039638HIT000261071HIT000074213HIT000070600HIT000063492HIT000454232
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-9 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000079607
Accession number AF432221.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730420- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000037856
Accession number BC017178.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730445- 732768
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000033289
Accession number BC007545.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730427- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000039638
Accession number BC022788.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730427- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000261071
Accession number BC063617.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730496- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000074213
Accession number AF217968.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to E3 ubiquitin-protein ligase CHIP.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_005852)  [Identity/coverage = 86.379%/99.34%] to Homo sapiens protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730224- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000070600
Accession number AF129085.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 99.67%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730430- 732767
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000063492
Accession number AF039689.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 99.34%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 730470- 732746
Strand +
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000454232
Accession number DQ587701.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 732239- 732267
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Internal acceptor site;  Internal donor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000074213Splicing isoformHIT000079607
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0012661
Representative H-Inv ID Representative H-Inv IDHIT000079607
Accession number AF432221.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition E3 ubiquitin-protein ligase CHIP; EC=6.3.2.-; Antigen NY-CO-7; CLL-associated antigen KW-8; Carboxy terminus of Hsp70-interacting protein; STIP1 homology and U box-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9UNE7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol STUB1 
HGNC aliases "STIP1 homology and U-box containing protein 1" 
HGNC name STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000067115
No. of interaction 7
Interaction partner(s) HIP000023525HIP000030913HIP000044043HIP000051197HIP000054903HIP000059101HIP000103123
BIND 153533;  258812; 
DIP 145029E;  145030E;  145031E;  59220E;  59226E;  88989E; 
MINT MINT-1785958;  MINT-1785982;  MINT-1786001;  MINT-1786017;  MINT-48435;  MINT-48665;  MINT-48831;  MINT-49546;  MINT-65548;  MINT-65549;  MINT-7903354;  MINT-7903373;  MINT-7904047;  MINT-7904367;  MINT-7996786;  MINT-8010453;  MINT-8010493;  MINT-8010505;  MINT-8010517;  MINT-8010534;  MINT-8010548;  MINT-8010565;  MINT-8010584;  MINT-8012530;  MINT-8084507; 
HPRD 00579;  00589;  00768;  00774;  00775;  00777;  00778;  01142;  01238;  01261;  01281;  01463;  01753;  01822;  02370;  02437;  02995;  03292;  03356;  03538;  03926;  03965;  03992;  04267;  04457;  04725;  05198;  05230;  06763;  06771;  06784;  06902;  07205;  08339;  08931;  09025;  10068;  10491;  10568;  15601; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:10273
KEGG GENES KEGG GENES(10273)
GeneCard GeneCardSTUB1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 233049_x_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 233049_x_at; 
HG-U133_Plus_2 233049_x_at; 
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3643303;  3643304;  3643307;  3643308;  3643309;  3675263;  3675265; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator