H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0012754 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0012754
Genomic location  G-integra Help Chromosome 16
Location 16p13.3
Position 3077683- 3086927
Strand -
Antisense cluster ID(s) HIX0012753 overlap at CDSs (all)
HIX0027051 overlap at CDSs (all)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:146439
KEGG GENES KEGG GENES(146439)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000389956HIT000028661HIT000028629HIT000088687HIT000426047
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-5 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000389956
Accession number BC128602.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (A1A5D9)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 3078069- 3085542
Strand -
Gene structure 9 exons
 
TOP 1-5 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000028661
Accession number AL833749.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (A1A5D9)  [Identity/coverage = 99.277%/81.69%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 3077687- 3083003
Strand -
Gene structure 8 exons
 
TOP 1-5 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000028629
Accession number AL833717.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (A1A5D9)  [Identity/coverage = 99.216%/50.2%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 3077683- 3081975
Strand -
Gene structure 7 exons
 
TOP 1-5 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000088687
Accession number BC015446.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (A1A5D9)  [Identity/coverage = 98.947%/18.7%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 3077727- 3078468
Strand -
Gene structure 2 exons
 
TOP 1-5 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000426047
Accession number AK307181.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (A1A5D9)  [Identity/coverage = 96.078%/10.04%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p13.3
Position 3079971- 3081022
Strand -
Gene structure 2 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000028629Splicing isoformHIT000028661Splicing isoformHIT000389956
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0012754
Representative H-Inv ID Representative H-Inv IDHIT000389956
Accession number BC128602.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Bicaudal D-related protein 2; BICD-related protein 2; BICDR-2; Coiled-coil domain-containing protein 64B;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (A1A5D9)  [Identity/coverage = 99.606%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000176700
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:146439
KEGG GENES KEGG GENES(146439)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT