H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0012849 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
 
 

 
TOP 1-10 11-13 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000059838
Accession number AB061371.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96Q15)  [Identity/coverage = 99.672%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18937738
Strand -
Gene structure 63 exons
 
TOP 1-10 11-13 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000000138
Accession number AB007881.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 100.0%/54.3%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18861794
Strand -
Gene structure 30 exons
 
TOP 1-10 11-13 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000028210
Accession number AL833298.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 99.68%/42.64%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819083- 18853697
Strand -
Gene structure 24 exons
 
TOP 1-10 11-13 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000015139
Accession number AK074359.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 100.0%/17.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18849786- 18861683
Strand -
Gene structure 10 exons
 
TOP 1-10 11-13 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000043205
Accession number AK123332.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 96.154%/0.71%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819265- 18822682
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000014177
Accession number AK057563.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 100.0%/0.71%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819100- 18821829
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000009068
Accession number AK025794.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18816180- 18818709
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000078894
Accession number AF395444.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 99.887%/96.29%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18908196
Strand -
Gene structure 61 exons
 
TOP 1-10 11-13 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000083209
Accession number AY014957.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 99.902%/83.8%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18887556
Strand -
Gene structure 51 exons
 
TOP 1-10 11-13 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000072915
Accession number AF186377.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 100.0%/65.36%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18871534
Strand -
Gene structure 38 exons
 
TOP 1-10 11-13 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000219251
Accession number U32581.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Serine/threonine-protein kinase SMG1; SMG-1; hSMG-1; EC=2.7.11.1; 61E3.4; Lambda/iota protein kinase C-interacting protein; Lambda-interacting protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96Q15)  [Identity/coverage = 100.0%/21.41%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18819082- 18844423
Strand -
Gene structure 13 exons
 
TOP 1-10 11-13 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000094807
Accession number BC037335.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18816175- 18819185
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000098711
Accession number BC047629.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol SMG1 
HGNC aliases "smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" 
HGNC name SMG1 phosphatidylinositol 3-kinase-related kinase 
Transcript feature NA
Genomic location  G-integra Chromosome 16
Location 16p12.3
Position 18816308- 18818823
Strand -
Gene structure 1 exons
Mini-G Locus map Locus map