H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0013704 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0013704
Genomic location  G-integra Help Chromosome 17
Location 17q11.2
Position 30771279- 30810337
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5717
KEGG GENES KEGG GENES(5717)
GeneCard GeneCardPSMD11*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000058008HIT000029623HIT000031936HIT000423399HIT000330976HIT000061621HIT000494966
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-7 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000058008
Accession number AB003102.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771531- 30808041
Strand +
Gene structure 14 exons
 
TOP 1-7 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000029623
Accession number BC000437.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771534- 30808042
Strand +
Gene structure 14 exons
 
TOP 1-7 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000031936
Accession number BC004430.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771534- 30808042
Strand +
Gene structure 14 exons
 
TOP 1-7 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000423399
Accession number AK290602.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771492- 30807932
Strand +
Gene structure 13 exons
 
TOP 1-7 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000330976
Accession number AK223196.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 99.764%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771528- 30807981
Strand +
Gene structure 14 exons
 
TOP 1-7 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000061621
Accession number AF001212.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 99.763%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771502- 30807911
Strand +
Gene structure 14 exons
 
TOP 1-7 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000494966
Accession number AK300342.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O00231)  [Identity/coverage = 100.0%/72.04%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30771522- 30804847
Strand +
Gene structure 9 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000058008Splicing isoformHIT000494966Splicing isoformHIT000423399
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0013704
Representative H-Inv ID Representative H-Inv IDHIT000058008
Accession number AB003102.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O00231)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol PSMD11 
HGNC aliases NA
HGNC name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000021383
No. of interaction 54
Interaction partner(s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
BIND 149953;  150092;  150230;  150378;  150430; 
DIP 112238E;  112623E;  113404E;  116339E;  116994E;  177176E;  177210E;  177435E; 
MINT MINT-3373344;  MINT-48607;  MINT-49599;  MINT-61588;  MINT-61715;  MINT-61831;  MINT-61959;  MINT-62003;  MINT-63021;  MINT-63022;  MINT-63023;  MINT-63024;  MINT-63025;  MINT-63027;  MINT-63028;  MINT-63029;  MINT-63030;  MINT-63032;  MINT-63033;  MINT-63034;  MINT-63035;  MINT-63036;  MINT-63037;  MINT-63039;  MINT-63040;  MINT-63041;  MINT-63042;  MINT-63043;  MINT-7230300;  MINT-7945693;  MINT-7947479; 
HPRD 00559;  00590;  00713;  01147;  01199;  01239;  01852;  01859;  02557;  02972;  02995;  03356;  03400;  03560;  03833;  03913;  03968;  04043;  04045;  04184;  04340;  04381;  04595;  04927;  06208;  06828;  07505;  07761;  10293;  10379;  10603;  11309;  11745;  11762;  12531;  13173;  14378;  14382;  16735;  17975;  18370; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5717
KEGG GENES KEGG GENES(5717)
GeneCard GeneCardPSMD11*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA150407; 
Affymetrix
GeneChip
HG-Focus 208777_s_at; 
HG-U133 208777_s_at; 
HG-U133A 208777_s_at; 
HG-U133A_2 208777_s_at; 
HG-U133B NA
HG-U133_Plus_2 208777_s_at; 
HG-U95 1191_s_at;  52399_at; 
HG-U95A 1191_s_at; 
HG-U95B 52399_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3717745;  3717749;  3717750;  3717751;  3717752;  3717753;  3717755;  3717758;  3717761;  3717763;  3717765;  3717767;  3717769;  3752691;  3752701;  3752703; 
HuGeneFL AB003102_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P207600; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P207600; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator