H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Inv cluster ID: HIX0016918 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0016918
Genomic location  G-integra Help Chromosome X
Location Xq22.1
Position 99929125- 99987135
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:94121
KEGG GENES KEGG GENES(94121)
GeneCard GeneCardSYTL4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000036898HIT000054225HIT000018965HIT000027508HIT000023109HIT000023303HIT000425385HIT000431952HIT000242866
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-9 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000036898
Accession number BC014913.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.851%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99929490- 99986498
Strand -
Gene structure 19 exons
 
TOP 1-9 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000054225
Accession number BX537410.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.851%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99929493- 99987102
Strand -
Gene structure 18 exons
 
TOP 1-9 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000018965
Accession number AK094110.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.553%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99930886- 99987108
Strand -
Gene structure 17 exons
 
TOP 1-9 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000027508
Accession number AL832596.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96C24)  [Identity/coverage = 96.429%/8.35%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99939711- 99987107
Strand -
Gene structure 12 exons
 
TOP 1-9 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000023109
Accession number AK098279.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96C24)  [Identity/coverage = 100.0%/17.59%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99929491- 99933780
Strand -
Gene structure 2 exons
 
TOP 1-9 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000023303
Accession number AK098473.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical protein.
Similarity category  Help Category: Hypothetical protein(Category V).
Hypothetical protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature NA
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99929125- 99930782
Strand -
Gene structure 1 exons
 
TOP 1-9 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000425385
Accession number AK292588.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.702%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature NA
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99930807- 99987104
Strand -
Gene structure 18 exons
 
TOP 1-9 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000431952
Accession number AK313086.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.702%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99931025- 99986497
Strand -
Gene structure 17 exons
 
TOP 1-9 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000242866
Accession number AF302493.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.406%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Transcript feature NA
Genomic location  G-integra Chromosome X
Location Xq22.1
Position 99929490- 99957103
Strand -
Gene structure 16 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal donor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000018965Splicing isoformHIT000054225Splicing isoformHIT000023109Splicing isoformHIT000431952Splicing isoformHIT000036898Splicing isoformHIT000027508
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0016918
Representative H-Inv ID Representative H-Inv IDHIT000036898
Accession number BC014913.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Synaptotagmin-like protein 4; Exophilin-2; Granuphilin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96C24)  [Identity/coverage = 99.851%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol SYTL4 
HGNC aliases NA
HGNC name synaptotagmin-like 4 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000097214
No. of interaction 218
Interaction partner(s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
BIND NA
DIP NA
MINT MINT-67002; 
HPRD 01296;  01455;  01535;  01721;  04235;  04845;  04846;  07505;  16101; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:94121
KEGG GENES KEGG GENES(94121)
GeneCard GeneCardSYTL4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsB140904;  AGhsB261014; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 227703_s_at;  229991_s_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 227703_s_at;  229991_s_at; 
HG-U133_Plus_2 227703_s_at;  229991_s_at; 
HG-U95 58702_at;  59376_at; 
HG-U95A NA
HG-U95B 58702_at;  59376_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3984496;  3984498;  4015441;  4015442;  4015444;  4015447;  4015449;  4015453;  4015455;  4015457;  4015459;  4015460;  4015461;  4015462;  4015463;  4015464;  4015465;  4015466;  4015467;  4015468;  4015469;  4015470;  4015473; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P11136; 
Whole Human Genome Oligo Microarray:PGID247 A_24_P122337; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator