H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0026468 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Desmin;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0026468
Genomic location  G-integra Help Chromosome 12
Location 12q13.12
Position 49686414- 49718359
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000047929
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000047929
Accession number AK128056.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Desmin;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q5XFN2)  [Identity/coverage = 63.874%/82.52%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 12
Location 12q13.12
Position 49686414- 49718359
Strand -
Gene structure 8 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0026468
Representative H-Inv ID Representative H-Inv IDHIT000047929
Accession number AK128056.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Desmin;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q5XFN2)  [Identity/coverage = 63.874%/82.52%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000074486
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 NA
HG-U133A NA
HG-U133A_2 NA
HG-U133B NA
HG-U133_Plus_2 NA
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3413857;  3413860;  3413862;  3413863;  3413887;  3453939;  3453940;  3453941;  3453943;  3453944;  3453945;  3453946;  3453948; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator