H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0028754 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: ETS domain-containing protein Elk-4; Serum response factor accessory protein 1; SAP-1; SRF accessory protein 1;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0028754
Genomic location  G-integra Help Chromosome 1
Location 1q32.1
Position 205566697- 205649630
Strand -
Antisense cluster ID(s) HIX0001516 overlap at CDSs (all)
HIX0029357 overlap at CDSs (all)
HIX0160217 overlap at CDSs (all)
HIX0161587 only overlap at UTR
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:2005Entrez Gene ID:85414
KEGG GENES KEGG GENES(2005)
GeneCard GeneCardSLC45A3GeneCardELK4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000096021HIT000053443HIT000027845HIT000008218HIT000024807HIT000083443HIT000423161HIT000432345HIT000196606HIT000261130HIT000196607HIT000646062HIT000646061HIT000646060HIT000066066HIT000646059
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-16 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000096021
Accession number BC040145.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition ETS domain-containing protein Elk-4; Serum response factor accessory protein 1; SAP-1; SRF accessory protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P28324)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205566697- 205601021
Strand -
Gene structure 10 exons
 
TOP 1-10 11-16 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000053443
Accession number BC050416.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Solute carrier family 45 member 3; Prostate cancer-associated protein 6; Prostein;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96JT2)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205626981- 205634025
Strand -
Gene structure 4 exons
 
TOP 1-10 11-16 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000027845
Accession number AL832933.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Solute carrier family 45 member 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_149093)  [Identity/coverage = 99.156%/42.86%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205626979- 205631796
Strand -
Gene structure 3 exons
 
TOP 1-10 11-16 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000008218
Accession number AK024944.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical protein.
Similarity category  Help Category: Hypothetical protein(Category V).
Hypothetical protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205578844- 205581144
Strand -
Gene structure 1 exons
 
TOP 1-10 11-16 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000024807
Accession number AL117645.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical protein.
Similarity category  Help Category: Hypothetical protein(Category V).
Hypothetical protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205577071- 205578681
Strand -
Gene structure 1 exons
 
TOP 1-10 11-16 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000083443
Accession number AY033593.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Solute carrier family 45 member 3; Prostate cancer-associated protein 6; Prostein;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96JT2)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205626979- 205649573
Strand -
Gene structure 5 exons
 
TOP 1-10 11-16 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000423161
Accession number AK290364.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Solute carrier family 45 member 3; Prostate cancer-associated protein 6; Prostein;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96JT2)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205628042- 205649630
Strand -
Gene structure 5 exons
 
TOP 1-10 11-16 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000432345
Accession number AK313479.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Solute carrier family 45 member 3; Prostate cancer-associated protein 6; Prostein;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96JT2)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205628362- 205649617
Strand -
Gene structure 5 exons
 
TOP 1-10 11-16 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000196606
Accession number M85164.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to ETS domain-containing protein Elk-4 isoform b.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_068567)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205588397- 205600902
Strand -
Gene structure 3 exons
 
TOP 1-10 11-16 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000261130
Accession number BC063676.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to ETS domain-containing protein Elk-4 isoform b.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_068567)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205588400- 205593020
Strand -
Gene structure 2 exons
 
TOP 1-10 11-16 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000196607
Accession number M85165.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition ETS domain-containing protein Elk-4; Serum response factor accessory protein 1; SAP-1; SRF accessory protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P28324)  [Identity/coverage = 99.768%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205585236- 205600902
Strand -
Gene structure 5 exons
 
TOP 1-10 11-16 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000646062
Accession number FJ805261.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205592916- 205649630
Strand -
Gene structure 5 exons
 
TOP 1-10 11-16 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000646061
Accession number FJ805260.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Solute carrier family 45 member 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_149093)  [Identity/coverage = 84.906%/9.58%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205592916- 205649630
Strand -
Gene structure 4 exons
 
TOP 1-10 11-16 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000646060
Accession number FJ805259.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Solute carrier family 45 member 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_149093)  [Identity/coverage = 88.406%/12.48%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205592916- 205649630
Strand -
Gene structure 3 exons
 
TOP 1-10 11-16 LAST 
Locus member number 15
H-Inv ID Transcript viewHIT000066066
Accession number AF075044.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205580327- 205580804
Strand -
Gene structure 1 exons
 
TOP 1-10 11-16 LAST 
Locus member number 16
H-Inv ID Transcript viewHIT000646059
Accession number FJ805258.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1q32.1
Position 205592916- 205649630
Strand -
Gene structure 2 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000196607Splicing isoformHIT000096021Splicing isoformHIT000423161Splicing isoformHIT000196606Splicing isoformHIT000027845Splicing isoformHIT000053443
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0028754
Representative H-Inv ID Representative H-Inv IDHIT000096021
Accession number BC040145.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition ETS domain-containing protein Elk-4; Serum response factor accessory protein 1; SAP-1; SRF accessory protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P28324)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ELK4  SLC45A3 
HGNC aliases "prostate cancer associated protein 6", "prostate cancer associated protein 2", "prostate cancer associated protein 8" 
HGNC name ELK4, ETS-domain protein (SRF accessory protein 1)  solute carrier family 45, member 3 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000042681
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:2005Entrez Gene ID:85414
KEGG GENES KEGG GENES(2005)
GeneCard GeneCardSLC45A3GeneCardELK4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA011618;  AGhsA251407; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 205994_at;  239304_at; 
HG-U133A 205994_at; 
HG-U133A_2 205994_at; 
HG-U133B 239304_at; 
HG-U133_Plus_2 205994_at;  239304_at; 
HG-U95 38497_at; 
HG-U95A 38497_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2376573;  2376594;  2452573;  2452577;  2452581;  2452587;  2452588;  2452589;  2452592;  2452593;  2452594;  2452595;  2452605;  2452606;  2452607; 
HuGeneFL M85165_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P161098; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P161098; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator