H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0033521 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0033521
Genomic location  G-integra Help Chromosome 7
Location 7q21.12
Position 87132949- 87342727
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5243
KEGG GENES KEGG GENES(5243)
GeneCard GeneCardABCB1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000558224HIT000422956HIT000194362HIT000390214HIT000062400HIT000328905HIT000558225HIT000427333HIT000254567HIT000254568HIT000078109HIT000078110HIT000078111HIT000254764HIT000434922
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-15 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000558224
Accession number EU852583.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133559- 87229500
Strand -
Gene structure 27 exons
 
TOP 1-10 11-15 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000422956
Accession number AK290159.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 99.922%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133175- 87342639
Strand -
Gene structure 29 exons
 
TOP 1-10 11-15 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000194362
Accession number M14758.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 99.844%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133180- 87342570
Strand -
Gene structure 29 exons
 
TOP 1-10 11-15 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000390214
Accession number BC130424.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 99.844%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87132949- 87230389
Strand -
Gene structure 28 exons
 
TOP 1-10 11-15 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000062400
Accession number AF016535.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 99.844%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133326- 87230183
Strand -
Gene structure 28 exons
 
TOP 1-10 11-15 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000328905
Accession number AB208970.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P08183)  [Identity/coverage = 99.842%/99.06%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133180- 87229465
Strand -
Gene structure 27 exons
 
TOP 1-10 11-15 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000558225
Accession number EU854148.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P08183)  [Identity/coverage = 99.916%/97.5%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133559- 87229500
Strand -
Gene structure 26 exons
 
TOP 1-10 11-15 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000427333
Accession number AK308467.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to ATP-binding cassette sub-family B member 5 isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_848654)  [Identity/coverage = 58.427%/21.92%] to Homo sapiens protein.
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87133180- 87161013
Strand -
Gene structure 9 exons
 
TOP 1-10 11-15 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000254567
Accession number AY425005.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, unclassifiable transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87229433- 87342570
Strand -
Gene structure 4 exons
 
TOP 1-10 11-15 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000254568
Accession number AY425006.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, unclassifiable transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87229433- 87342570
Strand -
Gene structure 3 exons
 
TOP 1-10 11-15 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000078109
Accession number AF345623.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, putative ncRNA.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87230119- 87342570
Strand -
Gene structure 2 exons
 
TOP 1-10 11-15 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000078110
Accession number AF345624.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, putative ncRNA.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87230119- 87342570
Strand -
Gene structure 2 exons
 
TOP 1-10 11-15 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000078111
Accession number AF345625.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, putative ncRNA.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87230325- 87342608
Strand -
Gene structure 2 exons
 
TOP 1-10 11-15 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000254764
Accession number AY452673.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, putative ncRNA.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87342477- 87342727
Strand -
Gene structure 1 exons
 
TOP 1-10 11-15 LAST 
Locus member number 15
H-Inv ID Transcript viewHIT000434922
Accession number AY425007.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q21.12
Position 87342477- 87342676
Strand -
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS; 
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000427333Splicing isoformHIT000422956
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0033521
Representative H-Inv ID Representative H-Inv IDHIT000558224
Accession number EU852583.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Multidrug resistance protein 1; EC=3.6.3.44; ATP-binding cassette sub-family B member 1; P-glycoprotein 1; AltName: CD_antigen=CD243;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08183)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ABCB1 
HGNC aliases "colchicin sensitivity" 
HGNC name ATP-binding cassette, sub-family B (MDR/TAP), member 1 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000041054
No. of interaction 6
Interaction partner(s) HIP000030471HIP000047598HIP000101592HIP000101592HIP000112664HIP000177131
BIND NA
DIP 116734E; 
MINT MINT-50920; 
HPRD 01740;  01818;  03028;  07028;  17843; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5243
KEGG GENES KEGG GENES(5243)
GeneCard GeneCardABCB1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL endocrine_exocrine; 
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 NA
HG-U133A NA
HG-U133A_2 NA
HG-U133B NA
HG-U133_Plus_2 NA
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 NA
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: {Inflammatory bowel disease 13, susceptibility to} (612244); 
Related information in OMIM OMIM ID:  171050;  Title: ATP-BINDING CASSETTE, SUBFAMILY B, MEMBER 1
Co-localized orphan diseases NA
Disease related mutation MutationView:  171050
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(5243); 
Disease Entrez Gene ID:(5243); 
Gene function Entrez Gene ID:(5243); 
Substance Entrez Gene ID:(5243); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA