H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0033626 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0033626
Genomic location  G-integra Help Chromosome 7
Location 7q11.23
Position 77166415- 77269388
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5782
KEGG GENES KEGG GENES(5782)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000100498HIT000422370HIT000329459HIT000099097HIT000196851HIT000433102HIT000491388HIT000498226
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-8 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000100498
Accession number D13380.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 99.872%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166845- 77269165
Strand +
Gene structure 18 exons
 
TOP 1-8 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000422370
Accession number AK289573.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166829- 77269040
Strand +
Gene structure 18 exons
 
TOP 1-8 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000329459
Accession number AB209524.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166782- 77268981
Strand +
Gene structure 18 exons
 
TOP 1-8 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000099097
Accession number BC050008.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 99.872%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166415- 77269388
Strand +
Gene structure 19 exons
 
TOP 1-8 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000196851
Accession number M93425.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 99.872%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166835- 77269386
Strand +
Gene structure 19 exons
 
TOP 1-8 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000433102
Accession number AK314236.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q05209)  [Identity/coverage = 99.872%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77166806- 77268597
Strand +
Gene structure 19 exons
 
TOP 1-8 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000491388
Accession number AK296764.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q05209)  [Identity/coverage = 99.441%/95.77%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77167386- 77268937
Strand +
Gene structure 17 exons
 
TOP 1-8 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000498226
Accession number AK303602.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q05209)  [Identity/coverage = 100.0%/93.21%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q11.23
Position 77167352- 77268049
Strand +
Gene structure 17 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000498226Splicing isoformHIT000491388Splicing isoformHIT000099097
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0033626
Representative H-Inv ID Representative H-Inv IDHIT000100498
Accession number D13380.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Tyrosine-protein phosphatase non-receptor type 12; EC=3.1.3.48; PTP-PEST; Protein-tyrosine phosphatase G1; PTPG1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q05209)  [Identity/coverage = 99.872%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000049627
No. of interaction 30
Interaction partner(s) HIP000023711HIP000023711HIP000024025HIP000026410HIP000027692HIP000028984HIP000030859HIP000037230HIP000042147HIP000042679HIP000044297HIP000045632HIP000054737HIP000055341HIP000059993HIP000066993HIP000078415HIP000079240HIP000079332HIP000094122HIP000096171HIP000097703HIP000097905HIP000099536HIP000099536HIP000102834HIP000103950HIP000135231HIP000144372HIP000362748
BIND 150157;  150159;  150160;  150161;  150162;  150163;  150165;  150166;  150167;  150168;  150169;  150170;  150224; 
DIP 136426E;  136427E;  136430E;  136431E;  136432E;  136443E;  136458E;  136459E;  136540E;  136553E;  136584E;  136586E;  136587E;  136589E;  136590E;  136593E;  71140E; 
MINT MINT-50149;  MINT-50150;  MINT-50151;  MINT-50152;  MINT-61767;  MINT-61769;  MINT-61770;  MINT-61771;  MINT-61772;  MINT-61773;  MINT-61774;  MINT-61775;  MINT-61776;  MINT-61777;  MINT-61778;  MINT-61825;  MINT-74926;  MINT-74927;  MINT-74933;  MINT-74936; 
HPRD 00226;  00286;  00342;  00547;  00579;  00697;  00808;  00975;  01080;  01280;  01281;  01423;  02314;  02571;  02786;  02971;  03380;  04248;  04381;  05116;  05891;  08639;  10104;  15225;  15489;  17137; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:5782
KEGG GENES KEGG GENES(5782)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA200624; 
Affymetrix
GeneChip
HG-Focus 202006_at; 
HG-U133 202006_at;  216884_at;  216915_s_at; 
HG-U133A 202006_at;  216884_at;  216915_s_at; 
HG-U133A_2 202006_at;  216884_at;  216915_s_at; 
HG-U133B NA
HG-U133_Plus_2 202006_at;  216884_at;  216915_s_at; 
HG-U95 1463_at; 
HG-U95A 1463_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3009962;  3009976;  3009977;  3009979;  3009981;  3009982;  3009983;  3009985;  3009993;  3009995;  3009996;  3009997;  3009999;  3010004;  3010007;  3010010;  3010012;  3010014;  3010015;  3010016; 
HuGeneFL M93425_at; 
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name:NA
Related information in OMIM OMIM ID:  600079;  Title: PROTEIN-TYROSINE PHOSPHATASE, NONRECEPTOR-TYPE, 12
Co-localized orphan diseases NA
Disease related mutation MutationView:  600079
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(5782); 
Disease Entrez Gene ID:(5782); 
Gene function Entrez Gene ID:(5782); 
Substance Entrez Gene ID:(5782); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA