H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0039754 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0039754
Genomic location  G-integra Help Chromosome 18
Location 18q21.2
Position 49866542- 51062273
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:1630
KEGG GENES KEGG GENES(1630)
GeneCard GeneCardDCC*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000323571HIT000429251HIT000497267HIT000333982HIT000195461HIT000217027
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-6 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000323571
Accession number X76132.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P43146)  [Identity/coverage = 99.862%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 49867158- 51057288
Strand +
Gene structure 29 exons
 
TOP 1-6 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000429251
Accession number AK310385.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P43146)  [Identity/coverage = 99.906%/75.4%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 50461142- 51056962
Strand +
Gene structure 27 exons
 
TOP 1-6 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000497267
Accession number AK302643.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P43146)  [Identity/coverage = 97.078%/63.86%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 50278537- 50942785
Strand +
Gene structure 22 exons
 
TOP 1-6 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000333982
Accession number BC036524.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P43146)  [Identity/coverage = 100.0%/10.99%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 50278534- 50942923
Strand +
Gene structure 19 exons
 
TOP 1-6 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000195461
Accession number M32292.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P43146)  [Identity/coverage = 99.867%/51.83%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 49867152- 50866168
Strand +
Gene structure 15 exons
 
TOP 1-6 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000217027
Accession number S81335.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.2
Position 51056667- 51056821
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000323571Splicing isoformHIT000429251
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0039754
Representative H-Inv ID Representative H-Inv IDHIT000323571
Accession number X76132.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Netrin receptor DCC; Colorectal cancer suppressor; Immunoglobulin superfamily DCC subclass member 1; Tumor suppressor protein DCC; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P43146)  [Identity/coverage = 99.862%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol DCC 
HGNC aliases "deleted in colorectal carcinoma" 
HGNC name DCC netrin 1 receptor 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000048669
No. of interaction 12
Interaction partner(s) HIP000023181HIP000024433HIP000045194HIP000051075HIP000059948HIP000087769HIP000092503HIP000101604HIP000114524HIP000130578HIP000148034HIP000354444
BIND 151503;  151527;  153466;  153467; 
DIP 143539E;  143544E;  143546E;  185121E;  185122E;  185123E;  185124E;  185125E;  185126E;  185127E;  185128E;  185129E;  185130E;  185131E;  185132E;  185133E;  185135E;  185136E;  185137E;  185138E;  185139E; 
MINT MINT-8199109;  MINT-8199123;  MINT-8199139;  MINT-8199557;  MINT-8199598;  MINT-8199615;  MINT-8199637;  MINT-8199775; 
HPRD 00062;  00475;  00949;  01496;  01592;  01604;  02155;  02548;  02740;  02799;  02859;  02999;  03283;  03368;  03479;  03734;  03736;  03737;  03756;  04697;  04699;  04702;  04716;  04881;  04882;  05053;  05923;  06428;  09458;  09459;  10199;  10426;  15971;  16048; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:1630
KEGG GENES KEGG GENES(1630)
GeneCard GeneCardDCC*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA081021;  AGhsA090516; 
Affymetrix
GeneChip
HG-Focus 206939_at; 
HG-U133 206939_at; 
HG-U133A 206939_at; 
HG-U133A_2 206939_at; 
HG-U133B NA
HG-U133_Plus_2 206939_at; 
HG-U95 32890_at; 
HG-U95A 32890_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3788563;  3788597;  3788613;  3788614;  3788615;  3788630;  3788631;  3788639;  3788641;  3788642;  3788648;  3788649;  3788652;  3788662;  3788663;  3788667;  3788668;  3788674;  3788675;  3788676;  3788677;  3788678;  3788679;  3788680;  3788682;  3788687;  3788689;  3788694;  3788695;  3788697;  3788699;  3788703;  3788706;  3808317;  3808429;  3808466; 
HuGeneFL X76132_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P158708; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P158708; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name:NA
Related information in OMIM OMIM ID:  120470;  Title: DELETED IN COLORECTAL CARCINOMA
Co-localized orphan diseases NA
Disease related mutation MutationView:  120470
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(1630); 
Disease Entrez Gene ID:(1630); 
Gene function Entrez Gene ID:(1630); 
Substance Entrez Gene ID:(1630); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA