H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Inv cluster ID: HIX0171640 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to von Willebrand factor; vWF; Fragment;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0171640
Genomic location  G-integra Help Chromosome 12
Location 12p13.31
Position 6058047- 6155941
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:7450
KEGG GENES KEGG GENES(7450)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000194077HIT000048360HIT000492224HIT000191405HIT000067349HIT000320939HIT000221712
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-7 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000194077
Accession number M10321.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Fragment;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q62935)  [Identity/coverage = 80.0%/100.0%] to Rattus norvegicus (Rat). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6058047- 6155941
Strand -
Gene structure 36 exons
 
TOP 1-7 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000048360
Accession number AK128487.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q28295)  [Identity/coverage = 75.0%/1.99%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6058728- 6062476
Strand -
Gene structure 1 exons
 
TOP 1-7 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000492224
Accession number AK297600.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Contains: von Willebrand antigen 2; von Willebrand antigen II; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P04275)  [Identity/coverage = 99.819%/39.35%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6058141- 6125973
Strand -
Gene structure 24 exons
 
TOP 1-7 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000191405
Accession number K03028.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Contains: von Willebrand antigen 2; von Willebrand antigen II; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P04275)  [Identity/coverage = 100.0%/6.86%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6058050- 6076680
Strand -
Gene structure 6 exons
 
TOP 1-7 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000067349
Accession number AF086470.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Von Willebrand factor preproprotein.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_000543)  [Identity/coverage = 99.27%/4.87%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6140690- 6153572
Strand -
Gene structure 4 exons
 
TOP 1-7 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000320939
Accession number X02672.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Contains: von Willebrand antigen 2; von Willebrand antigen II; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P04275)  [Identity/coverage = 100.0%/2.95%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6058170- 6059014
Strand -
Gene structure 2 exons
 
TOP 1-7 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000221712
Accession number U81237.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Contains: von Willebrand antigen 2; von Willebrand antigen II; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P04275)  [Identity/coverage = 99.585%/8.57%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 12
Location 12p13.31
Position 6128156- 6128878
Strand -
Gene structure 1 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0171640
Representative H-Inv ID Representative H-Inv IDHIT000194077
Accession number M10321.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to von Willebrand factor; vWF; Fragment;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q62935)  [Identity/coverage = 80.0%/100.0%] to Rattus norvegicus (Rat). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000111581
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:7450
KEGG GENES KEGG GENES(7450)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsC081122; 
Affymetrix
GeneChip
HG-Focus 202112_at; 
HG-U133 202112_at; 
HG-U133A 202112_at; 
HG-U133A_2 202112_at; 
HG-U133B NA
HG-U133_Plus_2 202112_at; 
HG-U95 48871_at;  607_s_at; 
HG-U95A 607_s_at; 
HG-U95B 48871_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3402287;  3402297;  3441686;  3441687;  3441688;  3441689;  3441691;  3441693;  3441695;  3441696;  3441699;  3441700;  3441701;  3441702;  3441705;  3441706;  3441709;  3441711;  3441712;  3441715;  3441716;  3441719;  3441720;  3441721;  3441724;  3441725;  3441726;  3441727;  3441730;  3441731;  3441735;  3441736;  3441740;  3441741;  3441742;  3441744;  3441745;  3441746;  3441747;  3441748;  3441749;  3441753;  3441754;  3441759;  3935943;  3935945;  3951539;  3951540;  3951541;  3951542;  3951547;  3951548;  3951555;  3951556;  3951557;  3951558;  3951560;  3951561;  3951562;  3951563;  3951564; 
HuGeneFL M10321_s_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P105562; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P105562; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: von Willebrand disease, autosomal recessive (277480); 
Related information in OMIM OMIM ID:  193400;  Title: VON WILLEBRAND DISEASE
Co-localized orphan diseases NA
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(7450); 
Disease Entrez Gene ID:(7450); 
Gene function Entrez Gene ID:(7450); 
Substance Entrez Gene ID:(7450); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA