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H-Inv cluster ID: HIX0201189 Created date: 26-Mar-2013 Last modified: 27-May-2015 Definition: Homeobox protein Hox-A13; Homeobox protein Hox-1J;

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Gene structure

H-Inv cluster ID		HIX0201189
Genomic location	Chromosome	7
	Location	7p15.2
	Position	27233122- 27239725
	Strand	-
Antisense cluster ID(s)		NA
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:3209;
	KEGG GENES	KEGG GENES(3209);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000265606;  HIT000089036;  HIT000098379;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

 

TOP 1-3 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000265606
Accession number		BC075791.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Homeobox protein Hox-A13; Homeobox protein Hox-1J;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (P31271)  [Identity/coverage = 99.742%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Representative transcript;
Genomic location	Chromosome	7
	Location	7p15.2
	Position	27236577- 27239725
	Strand	-
Gene structure		2 exons

 

TOP 1-3 LAST

Locus member number		2
H-Inv ID		HIT000089036
Accession number		BC016712.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Homeobox protein Hox-A13; Fragment;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (P50210)  [Identity/coverage = 100.0%/47.66%] to Ambystoma mexicanum (Axolotl). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	7
	Location	7p15.2
	Position	27236499- 27237972
	Strand	-
Gene structure		1 exons

 

TOP 1-3 LAST

Locus member number		3
H-Inv ID		HIT000098379
Accession number		BC046515.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Non-protein-coding;
Definition		Non-protein-coding transcript, non-protein coding (noncoding) transcript
Similarity category		Category: Non-protein coding transcript.
		NA
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	7
	Location	7p15.2
	Position	27235818- 27235994
	Strand	-
Gene structure		1 exons

Gene function information

H-Inv cluster ID		HIX0201189
Representative H-Inv ID		HIT000265606
Accession number		BC075791.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Homeobox protein Hox-A13; Homeobox protein Hox-1J;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (P31271)  [Identity/coverage = 99.742%/100.0%] to Homo sapiens (Human). protein.
Gene family/group	H-Inv gene family/group ID	HIF0000005
	Gene family/group name	Zinc finger, C2H2-type (IPR007087).
	Evidence motif (InterPro) ID	3
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000105531
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:3209;
	KEGG GENES	KEGG GENES(3209);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Zinc finger, C2H2-type (IPR007087). Similarity search tool;  TACT;

Gene expression information

Last modified:27-May-2015

Tissue-specific expression			NA
Probe information	AceGene		AGhsA200723;
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	231786_at;
		HG-U133A	NA
		HG-U133A_2	NA
		HG-U133B	231786_at;
		HG-U133_Plus_2	231786_at;
		HG-U95	60937_at;
		HG-U95A	NA
		HG-U95B	NA
		HG-U95C	60937_at;
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	2994174;  3043001;  3043002;  3043003;  3043004;  3043005;  3043006;  3043007;  3043008;  3043009;  3043010;  3043011;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P389281;
		Whole Human Genome Oligo Microarray:PGID247	A_23_P31306;  A_23_P389281;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:27-May-2015

Disease relation			Disease name: Guttmacher syndrome (176305);  Disease name: Hand-foot-uterus syndrome (140000);
Related information in OMIM			OMIM ID:  142959;  Title: HOMEOBOX A13
Co-localized orphan diseases			NA
Disease related mutation			NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)	Gene name	Entrez Gene ID:(3209);
	Disease	Entrez Gene ID:(3209);
	Gene function	Entrez Gene ID:(3209);
	Substance	Entrez Gene ID:(3209);
Related H-InvDB links			DiseaseInfo Viewer;  LEGENDA;