H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0201751 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Interstitial collagenase; EC=3.4.24.7; Matrix metalloproteinase-1; MMP-1; Precursor;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0201751
Genomic location  G-integra Help Chromosome 11
Location 11q22.2
Position 102621801- 102625674
Strand -
Antisense cluster ID(s) HIX0019185 overlap at CDSs (all)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:100128088
KEGG GENES KEGG GENES(100128088)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000329964
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000329964
Accession number AB231724.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Interstitial collagenase; EC=3.4.24.7; Matrix metalloproteinase-1; MMP-1; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P13943)  [Identity/coverage = 54.545%/7.05%] to Oryctolagus cuniculus (Rabbit). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 11
Location 11q22.2
Position 102622854- 102624183
Strand -
Gene structure 2 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0201751
Representative H-Inv ID Representative H-Inv IDHIT000329964
Accession number AB231724.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Interstitial collagenase; EC=3.4.24.7; Matrix metalloproteinase-1; MMP-1; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P13943)  [Identity/coverage = 54.545%/7.05%] to Oryctolagus cuniculus (Rabbit). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000155032
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:100128088
KEGG GENES KEGG GENES(100128088)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsC160307; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 NA
HG-U133A NA
HG-U133A_2 NA
HG-U133B NA
HG-U133_Plus_2 NA
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3388775; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator