H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0207400 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protein PBMUCL2; HLA complex group 22; Panbronchiolitis-related mucin-like protein 2; Precursor;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0207400
Genomic location  G-integra Help Chromosome 6
Location 6p21.33
Position 31021227- 31027654
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:285834
KEGG GENES KEGG GENES(285834)
GeneCard GeneCardHCG22*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000563781_01HIT000563990_01
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-2 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000563781_01
Accession number AB560771.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein PBMUCL2; HLA complex group 22; Panbronchiolitis-related mucin-like protein 2; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (E2RYF7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HCG22 
HGNC aliases "HLA complex group 22 (non-protein coding)" 
HGNC name HLA complex group 22 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 6
Location 6p21.33
Position 31021227- 31027654
Strand +
Gene structure 4 exons
 
TOP 1-2 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000563990_01
Accession number AB600644.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein PBMUCL2; HLA complex group 22; Panbronchiolitis-related mucin-like protein 2; Precursor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RYF7)  [Identity/coverage = 98.958%/76.49%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HCG22 
HGNC aliases "HLA complex group 22 (non-protein coding)" 
HGNC name HLA complex group 22 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 6
Location 6p21.33
Position 31021227- 31027654
Strand +
Gene structure 4 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms Internal AS; 
Position of alternative splicing isoforms Internal acceptor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000563990_01Splicing isoformHIT000563781_01
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0207400
Representative H-Inv ID Representative H-Inv IDHIT000563781_01
Accession number AB560771.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein PBMUCL2; HLA complex group 22; Panbronchiolitis-related mucin-like protein 2; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (E2RYF7)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol HCG22 
HGNC aliases "HLA complex group 22 (non-protein coding)" 
HGNC name HLA complex group 22 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000381820
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:285834
KEGG GENES KEGG GENES(285834)
GeneCard GeneCardHCG22*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT