H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0214533 Created date: 20-May-2015 Last modified: 27-May-2015
Definition: Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0214533
Genomic location  G-integra Help Chromosome 2
Location 2q31.1
Position 172543919- 172604921
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:1781
KEGG GENES KEGG GENES(1781)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000009848HIT000008016HIT000496490HIT000393366
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-4 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000009848
Accession number AK026574.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q13409)  [Identity/coverage = 99.478%/60.03%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q31.1
Position 172582703- 172604920
Strand +
Gene structure 9 exons
 
TOP 1-4 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000008016
Accession number AK024742.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q13409)  [Identity/coverage = 100.0%/23.35%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q31.1
Position 172586293- 172604920
Strand +
Gene structure 4 exons
 
TOP 1-4 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000496490
Accession number AK301866.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q13409)  [Identity/coverage = 98.056%/56.43%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q31.1
Position 172583068- 172604917
Strand +
Gene structure 8 exons
 
TOP 1-4 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000393366
Accession number DQ786313.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O88487)  [Identity/coverage = 100.0%/13.56%] to Mus musculus (Mouse). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q31.1
Position 172600657- 172604916
Strand +
Gene structure 3 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms NA
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000009848Splicing isoformHIT000496490
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0214533
Representative H-Inv ID Representative H-Inv IDHIT000009848
Accession number AK026574.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic dynein 1 intermediate chain 2; Cytoplasmic dynein intermediate chain 2; Dynein intermediate chain 2, cytosolic; DH IC-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q13409)  [Identity/coverage = 99.478%/60.03%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000006425
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:1781
KEGG GENES KEGG GENES(1781)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsC020513; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 211684_s_at; 
HG-U133A 211684_s_at; 
HG-U133A_2 211684_s_at; 
HG-U133B NA
HG-U133_Plus_2 211684_s_at; 
HG-U95 35787_at;  35788_at; 
HG-U95A 35787_at;  35788_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2515313;  2515315;  2515317;  2515318;  2515319;  2515321;  2515324;  2515325;  2515326;  2515327;  2586836;  3246614;  3246615;  3246616;  3246617;  3246618;  3246619;  3289232;  3289234; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P154108; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P154108;  A_32_P30926; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator