H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0224164 Created date: 20-May-2015 Last modified: 27-May-2015
Definition: Similar to Mitochondrial Rho GTPase 1 isoform 2.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0224164
Genomic location  G-integra Help Chromosome 17
Location 17q11.2
Position 30469649- 30569181
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:55288
KEGG GENES KEGG GENES(55288)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000025525
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000025525
Accession number AL136929.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitochondrial Rho GTPase 1 isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001028738)  [Identity/coverage = 100.0%/88.01%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 17
Location 17q11.2
Position 30469649- 30536757
Strand +
Gene structure 18 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0224164
Representative H-Inv ID Representative H-Inv IDHIT000025525
Accession number AL136929.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitochondrial Rho GTPase 1 isoform 2.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001028738)  [Identity/coverage = 100.0%/88.01%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000067741
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:55288
KEGG GENES KEGG GENES(55288)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsB240808; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 224044_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 224044_at; 
HG-U133_Plus_2 224044_at; 
HG-U95 50998_at; 
HG-U95A NA
HG-U95B 50998_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3503427;  3503428;  3503429;  3503430;  3503431;  3717541;  3717542;  3717545;  3717548;  3717549;  3717550;  3717551;  3717555;  3717556;  3717558;  3717559;  3717560;  3717561;  3717562;  3717563;  3717564;  3717566;  3717567;  3717568;  3717570;  3717572;  3717576;  3717577;  3717578;  3717579;  3752582;  3752587;  3780495;  3780496;  3925286;  3925287;  3925288; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P433204; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P433204;  A_24_P59765; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator