H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
H-Inv cluster ID (HIX)
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Definition*
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---
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H-Invitational ID:
HIT000000168
Accession number:
AB007920
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Transcript original information
Accession number
AB007920.2
CAGE tag ID
NA
EST ID
NA
Clone Number
pf06424
Experimental resources
NBRC
;
HGPD
;
Sequence data provider
Provider:
KDRI
;
Annotation project
H-Invitational FLcDNA
Length of cDNA
7335[bp] (No. of exon:21)[A:2088 T:2021 G:1569 C:1657]
Devision
HUM
Molecular type
mRNA
Library origin
Cell type
NA
Tissue type
brain
Develpmental stage
NA
Sequence quality information
CDS feature
N-truncated
Kozak sequence
NA
PolyA
NA
Vector/adapter sequence
NA
Frame shift
NA
Remaining intron
NA
Splice site acceptor (NAGNAG)
CAGAAG;
Transcript quality feature
Truncation;
Notes
NA
GCAGTTAGAAGAAGAGGTTAAAGATCTAGCAGACAAGAAAGAATCAGTTG CACATTGGGAAGCCCAAATCACAGAAATAATTCAGTGGGTCAGCGATGAA AAGGATGCACGAGGGTATCTTCAGGCCTTAGCTTCTAAAATGACTGAAGA ATTGGAGGCATTAAGAAATTCCAGCTTGGGTACACGAGCAACAGATATGC CCTGGAAAATGCGTCGTTTTGCGAAACTGGATATGTCAGCTAGACTGGAG TTGCAGTCGGCTCTGGATGCAGAAATAAGAGCCAAACAGGCCATCCAAGA AGAGTTGAATAAAGTTAAAGCATCTAATATCATAACAGAATGTAAACTAA AAGATTCAGAGAAGAAGAACTTGGAACTACTCTCAGAAATCGAACAGCTG ATAAAGGACACTGAAGAGCTTAGATCTGAAAAGGGTATAGAGCACCAAGA CTCACAGCATTCTTTCTTGGCATTTTTGAATACGCCTACCGATGCTCTGG ATCAATTTGAAACTGTAGACTCCACTCCACTTTCAGTTCACACACCAACC TTAAGGAAAAAAGGATGTCCTGGTTCAACTGGCTTTCCACCTAAGCGCAA GACTCACCAGTTTTTTGTAAAATCTTTTACTACTCCTACCAAGTGTCATC AGTGTACCTCCTTGATGGTGGGTTTAATAAGACAGGGCTGTTCATGTGAA GTGTGTGGATTCTCATGCCATATAACTTGTGTAAACAAAGCTCCAACCAC TTGTCCAGTTCCTCCTGAACAGACAAAAGGTCCCCTGGGTATAGATCCTC AGAAAGGAATAGGAACAGCATATGAAGGTCATGTCAGGATTCCTAAGCCA GCTGGAGTGAAGAAAGGGTGGCAGAGAGCACTGGCTATAGTGTGTGACTT CAAACTCTTTCTGTACGATATTGCTGAAGGAAAAGCATCTCAGCCCAGTG TTGTCATTAGTCAAGTGATTGACATGAGGGATGAAGAATTTTCTGTGAGT TCAGTCTTGGCTTCTGATGTTATCCATGCAAGTCGGAAAGATATACCCTG TATATTTAGGGTCACAGCTTCCCAGCTCTCAGCATCTAATAACAAATGTT CAATCCTGATGCTAGCAGACACTGAGAATGAGAAGAATAAGTGGGTGGGA GTGCTGAGTGAATTGCACAAGATTTTGAAGAAAAACAAATTCAGAGACCG CTCAGTCTATGTTCCCAAAGAGGCTTATGACAGCACTCTACCCCTCATTA AAACAACCCAGGCAGCCGCAATCATAGATCATGAAAGAATTGCTTTGGGA AACGAAGAAGGGTTATTTGTTGTACATGTCACCAAAGATGAAATTATTAG AGTTGGTGACAATAAGAAGATTCATCAGATTGAACTCATTCCAAATGATC AGCTTGTTGCTGTGATCTCAGGACGAAATCGTCATGTACGACTTTTTCCT ATGTCAGCATTGGATGGGCGAGAGACCGATTTTTACAAGCTGTCAGAAAC TAAAGGGTGTCAAACCGTAACTTCTGGAAAGGTGCGCCATGGAGCTCTCA CATGCCTGTGTGTGGCTATGAAAAGGCAGGTCCTCTGTTATGAACTATTT CAGAGCAAGACCCGTCACAGAAAATTTAAAGAAATTCAAGTCCCATATAA TGTCCAGTGGATGGCAATCTTCAGTGAACAACTCTGTGTGGGATTCCAGT CAGGATTTCTAAGATACCCCTTGAATGGAGAAGGAAATCCATACAGTATG CTCCATTCAAATGACCATACACTATCATTTATTGCACATCAACCAATGGA TGCTATCTGCGCAGTTGAGATCTCCAGTAAAGAATATCTGCTGTGTTTTA ACAGCATTGGGATATACACTGACTGCCAGGGCCGAAGATCTAGACAACAG GAATTGATGTGGCCAGCAAATCCTTCCTCTTGTTGTTACAATGCACCATA TCTCTCGGTGTACAGTGAAAATGCAGTTGATATCTTTGATGTGAACTCCA TGGAATGGATTCAGACTCTTCCTCTCAAAAAGGTTCGACCCTTAAACAAT GAAGGATCATTAAATCTTTTAGGGTTGGAGACCATTAGATTAATATATTT CAAAAATAAGATGGCAGAAGGGGACGAACTGGTAGTACCTGAAACATCAG ATAATAGTCGGAAACAAATGGTTAGAAACATTAACAATAAGCGGCGTTAT TCCTTCAGAGTCCCAGAAGAGGAAAGGATGCAGCAGAGGAGGGAAATGCT ACGAGATCCAGAAATGAGAAATAAATTAATTTCTAATCCAACTAATTTTA ATCACATAGCACACATGGGTCCTGGAGATGGAATACAGATCCTGAAAGAT CTGCCCATGCCAGGTTTCCCTTATCCATCCCCTCATCATCACTCCGGTCT GATCTCCTCTCCGATCAACTTTGAACACATCTATCACATGACTGTTAATT CTGCTGAAAAATTTCTCTCTCCTGATTCCATAAACCCTGAATATTCCCCG TCTCTGCGCTCTGTCCCTGGTACACCAAGCTTTATGACTCTGAGGAACCC TCGGCCTCAGGAAAGTCGGACAGTATTCAGTGGCTCAGTCAGTATTCCAT CTATCACCAAATCCCGCCCTGAGCCAGGCCGCTCCATGAGTGCTAGCAGT GGCTTGTCAGCAAGGTCATCCGCACAGAATGGCAGCGCATTAAAGAGGGA ATTCTCTGGAGGAAGCTACAGTGCCAAGCGGCAGCCCATGCCCTCCCCGT CAGAGGGCTCTTTGTCCTCTGGAGGCATGGACCAAGGAAGTGATGCCCCA GCGAGGGACTTTGACAAAGAGGACTCTGACTCTCCGAGGCATTCCACAGC TTCCAACAGTTCCAACCTAAGCAGCCCCCCAAGCCCAGTTTCACCCCGAA AAACCAAGAGCCTCTCCCTGGAGAGCACTGACCGCGGGAGCTGGGACCCG TGAGCTGCCTCAGCACTGGGACCTCTCGCTCTCCGCTCCCTGCCACTCGC CTCCTCTCACTTTCATCTCTTCCCTCCACCTCGCCTGCTCGGCCTGAAAG CCACCAGGGGCTGGCAGCAGTAGCAGGACAGGGATTCAGGAGTTCTGACG ACACGACTCTCAGATCCACGCCCCCAGCCTAACAGCAACAACAAAGACAG ACTTTCCGTAGCAGCTTAGATTAACGTTGATTTCATTCCATGCACTTAGA GTTGCTTTCAGTAACATTTTACCCCTACTCCCAAAGGTAGCTTAAATAGA CAGATTACACAAATGTAAGTGATAAGAATAAGATTAGACAGATTTTGCTT TCACAGTAGAGTCTCATTATAGTCCTAAAATAGCTCATGGGCTTCTCCGC ATCCAGAAGGGAGAATTGGTCCCTGGAGTGGCTCACTAAGCTCTTAATCA GCAAACGCAGTGAGTATCAACCTGATTGTTGCCAGGAAATCCTTATGAAT TAAAACAATGCATATTTTACTACAGTACAGAGTTTAAATGAATACATAAA TGTAGAAGTACTGAATGTATATATTTAAAAGGAGCCTCTTGTATTCAACA AAAGATGGATGCATATATAAGAGAGATGATTTAATTTAAAGAAATATGTT GTTTCTTGTCTGTAATGTAATGTAAAGGGTGGAAAGGCCTCAAGCTCACA TTTGTAGAGAGAGAGCGAGAGAAATCAGAGTTCCCTTTATTGCCCTGTCC TCAAACTGGTCATAGGCTCTAGTCACCTGGGGAGCTGTAGAAAACACTTG CAGAGCCAGGTTTTGCTGGTTTGGGGCATGCCCTGGGCACCAGAGCTTTA ACATTTGAAGCCACTTCAGCAGCAGCAGCAAAAGGCGAACTCATCTCTAC CCAAGATGTTTCTTTTCCTAGTGGTGGAATTTGAACACTTCTCACTTTTT ATTGTATTTTATCTTCCGCAGATAAATGTAGAAATACACGATTCTGTCAC CTCTGATCCCTTCCATCTGAAAGGTTACAAGGAGTGTTGTAGCTTCTGAA GGTGCAGAAAACAATTTCTAAAAATGCTTTTATTCCTGGGCTAATCCTGT CCCTCCCTAAGTCACAGCGAGGTGTCTGTCCCAGGGCTGGAGATGCTTCC CAAGGAGGAGTCTGTTTTGTTGAGAGTGGGCGTGGGCTTCTTCACATAAG CCTGGGGAAGGAAGAAAAAACGGCTTTCATTACCAAATAATGTAAAACCT CAAAAGCAAGGGCTTCAACAGCCTTAACCAAATATTATTCCCCATAGCCA GTGGAAAATGGATGTGACAACCCCAGTGCGCAGGCCAGAGTGAGTGAGCC CAGCACGGCGCTCCGACTGGCTTCCTCTCTCAGGTGCTGGATTGTGGGGT TAGTGGCATTTCCAGCTGGATTCCTCCTGTTGTAGTTGCCATAAGGAAAT GAGATGCAGAATCAGAAGGATCTATTTCTACAGAATCATTTCACCAGTTA AGCACATGAGTAGAGAAAGAGATAAAAATAAAAGTATCTCATGAAGGAAA GAGATTTTGCCTCTCTTTTACTTTTCACCTAAGTTTCTCTGAGAAATAGA GACAGGATTCTCTCTTTAAAATTCAGTGAAAATGAAGAAAGTTTTCCTGC AGTTGCTAACCTGAGTTGCAGTGTTTAAGGCCATCATTTCACTGCTGCTG TCTGTGACTCCACGTCTGTGTCACTGAGGTGACCTGCGTGTCACTGAGGT GGCCACCATGCTGGCCTGCGGCATGTGCAGGGAGCTGAGGCTGTTTCCAG GTGATGCTGCTGTGTGGAGAAGGTTCTGAGATGCAGTGAGGGAAGAAAGG ATCCTGCTGGGGATTCCATTGTAAGCACCTATAATCGGGAATTTTCATGT AACAGCTTTGACATTTAAACATTCTGAGTTTGGTGCCAGCTCAGATTTGA TTATATTTTATTTTGGATGGGTGTAATTCACAGCACAGTTCTAATCTCCC AAATCTTTCTGCTTTTTAGAATGAAGTATAAAAATACTTTTCTCACCTGA ATACCAAGGGTTGGCCCTTTAGTTGGATCATTGTCATATGACTTGGTAGA TCCTTGTCCTCAGCACCTCACGTGAGAGAAGGGAGTCAGCCAGCCGGCCC CCTGCTTGGTGCTCGTGACCAGCTCGCACCCCTTCTGTCCACCCTTCTCT CCTCTCCTCCCCACTCTCCCCACCCTCCTCACTCTCCCCACCCTCCCCTC CTCTCCTCCTCACTCTTCCCACCCTCCCCATCCCCACCCTCCCCATCCTC CTCTTCCCTTTCCCCTTGCCTTCTCCTCTCTCCCTTCTCTTCTCAGGCAG GGAGGAGGCCATCCCAAGCCGAGATTAACAGGACTTGACATAAGCCATTA GTTTGTAGCTTTGACAAGTAATTATGAATTTTTGTTGCTTATAGGTGCTT ATTTTGCAAAGGATGCTTTTAAGATCAAAATAATAACCCTACCTAAAGTC TAGCTCCACTGCTATGGGTCATACTCTTCAGCCTCCCAACAGGGCAGAGA GAGAGAGCTACTGAGGCTTGTCTAGGTTGCCAGGCTAACTGGGCGGCTTG TCCATATTCACCCCATGGATTGCACCATGGCACTCTTTGATTTTTCCACT GCAATGGCAAGTAATCTCATCAGTCATAATAGAGCAGTCCCGAATGCGTG CAGATTCTAAAAGCAGGGCTTTAGGAGAGAAACACTGCCAGGGGGAATAG TTTTGGGGAGGGTTTTCCCAAAATAACGGTCATCCTACTGGGTTTATCCC ACCCTTAAATATGAAGCCTGTTACCTCCAGAAGCTTCTGAGAAGAATGAT GTGAAAAGACAGGGAGTGGGTTCTAGGCAAAGAAAACATAATGACCATTC AGAGGAATCAGTAGCACAGCTCACAGATAAAGTATTTTATTACTATCTGA AGTTTTCTTTTGTTTTCATGCAGGACATTTTAAAAACGTATATGGCAGCA GAAACCTGTTTCTCAATAGAAAAAATACATTCAGAGGCATTTCTGGGATA GTCTATCTGTGTTAGTATTTGGTGCTATCTATGTCCAGCCAAGTTATCTA CCCTCAAATTCTGACTAATCATGTTTGTGCTTTGGGTATTTAAAATTACA TACATATATATTCTTTTTGCCAAAAACAAAAGTCTTGCTTCTTGTCAAAT GATTGCTAAAGTAGATCTTACATTTTTTGTTATTATGTATGTATTTATAC ACATCCCCAACACACTTAGTGATTTCTGTTATTTCCTAGGGAGCACAGCT TTAAGGCTATGAGATACAACTAAAAGGAGCCCATCTATTTGGTTTTCCAG CCAATTATTGTACTCACATTTCAGGGGAGAATCTGAAATTCCTGTCATGT TTACAGCAACAATCTATCATTCCTGGCTAGCTCTCAGCCTCTCTCTCCTT CCATAGGTTAGAATTATGTCATTTTGTTACTTAGTGGCCACGTCTATTTC TGAGAAAGACTGGTTACATTTATGTGGCATCTCAGGTATCATTAAGGAAA AGCCAGAGCAGGGGTGAGCAGAGGTCAAAACCACAGACGCAGCAGGGCCA TTTGCCGCCTTTGGCCGGGATCACAACCACTGCAGTCTCCCAGCAGGTAG GCCTTGCCAAGCCTAAGGCTCCCCATCCAATCTAGACAGAGGGGCGCTCA GAGCAGACTTTGCCGTAGCCCATGTCTGGTGAGCACAACAGGGAATGAAT TGGGCACTCCACTCCCCCGTCTCTCTGGCCCAGCCCTGAACTAGATGAGC TGCATTTCATGGAGCCCATTTTAAAATCTCTTTCCTTATGACTTTGTTAC TCAAGTCCAGAGTTCTCTGTGCACTTCTGCTAGATAAGGAGTGTAAGCCC TGCCCCCCAGCACTGGCAGCACGCTGGGCCCTCCCCACACAGGACACCGT GCAGTTCCGGGGGAAGCTGACTCAAATCAACCTTGAAATCTCATGAAAAC AAAATGACTTGTCTTTTTATTTGATAGTGTAATATCATTCATTTTATAAA TTTTTTAGGGTTTTTCTCGTAATATTGTAGTTTTGCATGGCCTGGTGTGA TCATTTTTTGGTTAGAATATAATGCTGACAAATGTGGATGGAGGGGAAGA TACTGCTTTAGCCTATCACTCCTTATTTTATTTTGTTTGGTTTTATGCCC TCAGTGTCTTAGGGAACTTTTTAAGAGATCCTCTGCTACCAAACAATGAT GTGGATTCTTTTGCACAGAAATATTTAAGGTGGGATGGTAAAAAATGTCA CAAAAGACTCCTCACCAATACTTTATGTTGATATCACTTAATATTAACCA GACTTTGCTGTATTGCAATAAAACAGAGAACTGTT
Gene structure information
H-Inv cluster ID
HIX0213687
Genomic location
Chromosome
1
Location
1q42.13
Position
227177567- 227268680
Strand
-
Possible duplicated location(s)
NA
Gene structure
21 exon(s)
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:8476
;
KEGG GENES
KEGG GENES(8476)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome alignment
;
Predicted CDS information
HIP ID
HIP000121463
Predicted CDS
2..2953; 983[aa]; Orientation:+2;
Codon Adaptation Index (CAI).
0.724
QLEEEVKDLADKKESVAHWEAQITEIIQWVSDEKDARGYLQALASKMTEE LEALRNSSLGTRATDMPWKMRRFAKLDMSARLELQSALDAEIRAKQAIQE ELNKVKASNIITECKLKDSEKKNLELLSEIEQLIKDTEELRSEKGIEHQD SQHSFLAFLNTPTDALDQFETVDSTPLSVHTPTLRKKGCPGSTGFPPKRK THQFFVKSFTTPTKCHQCTSLMVGLIRQGCSCEVCGFSCHITCVNKAPTT CPVPPEQTKGPLGIDPQKGIGTAYEGHVRIPKPAGVKKGWQRALAIVCDF KLFLYDIAEGKASQPSVVISQVIDMRDEEFSVSSVLASDVIHASRKDIPC IFRVTASQLSASNNKCSILMLADTENEKNKWVGVLSELHKILKKNKFRDR SVYVPKEAYDSTLPLIKTTQAAAIIDHERIALGNEEGLFVVHVTKDEIIR VGDNKKIHQIELIPNDQLVAVISGRNRHVRLFPMSALDGRETDFYKLSET KGCQTVTSGKVRHGALTCLCVAMKRQVLCYELFQSKTRHRKFKEIQVPYN VQWMAIFSEQLCVGFQSGFLRYPLNGEGNPYSMLHSNDHTLSFIAHQPMD AICAVEISSKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPY LSVYSENAVDIFDVNSMEWIQTLPLKKVRPLNNEGSLNLLGLETIRLIYF KNKMAEGDELVVPETSDNSRKQMVRNINNKRRYSFRVPEEERMQQRREML RDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMPGFPYPSPHHHSGL ISSPINFEHIYHMTVNSAEKFLSPDSINPEYSPSLRSVPGTPSFMTLRNP RPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKRE FSGGSYSAKRQPMPSPSEGSLSSGGMDQGSDAPARDFDKEDSDSPRHSTA SNSSNLSSPPSPVSPRKTKSLSLESTDRGSWDP*
Gene function information
H-Inv ID
HIT000000168
H-Inv cluster ID
HIX0213687
Accession number
AB007920.2
CAGE tag ID
NA
EST ID
NA
Transcript feature
NO;
Coding potential
Protein coding;
Definition
Similar to Serine/threonine-protein kinase MRCK alpha; EC=2.7.11.1; CDC42-binding protein kinase alpha; DMPK-like alpha; Myotonic dystrophy kinase-related CDC42-binding kinase alpha; MRCK alpha; Myotonic dystrophy protein kinase-like alpha;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q5VT25
) [Identity/coverage = 99.783%/53.93%] to Homo sapiens (Human). protein.
Experimental evidence
Protein evidence
PubMed ID
9092543
;
9418861
;
9455484
;
11283256
;
11340065
;
11399775
;
12568720
;
15723050
;
16710414
;
17344846
;
17974005
;
18669648
;
18854160
;
20188707
;
21269460
;
21406692
;
21457715
;
ALL
;
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
DDBJ
KIAA0451
UniProt
CDC42BPA
EC number
NA
GGDB
(GlycoGene Database)
Gene symbol
NA
Familly
NA
Designation
NA
Expression
NA
KEGG metabolic pathway
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000121463
No. of interaction
1
Interaction partner(s)
HIP000023385
;
BIND
NA
DIP
NA
MINT
NA
HPRD
NA
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:8476
;
KEGG GENES
KEGG GENES(8476)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA
Related H-InvDB links
Gene family;
Similarity Search Tool;
TACT
;
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.
NA
Subcellular localization information
Last modified:27-May-2015
WoLF PSORT
nuclear; cytosol;
Target P
Other
SOSUI
soluble protein
TMHMM
soluble protein
PTS1
Not targeted
Related H-InvDB links
LIFEdb;
JRE-1.4.0 or later is required.
Download JRE at
Sun's web site.
Protein structure information (GTOP)
Last modified:27-May-2015
Start
End
PDB_ID
E-value
Identity
Coverage
SCOP_ID
153
213
1tbnA
6e-18
36.1
61/66
g.49.1.1
240
343
1qqgA1
1e-06
10.6
94/103
b.55.1.2
Related H-InvDB links
GTOP
Gene expression information
Last modified:27-May-2015
Tissue-specific expression
NA
Probe
information
AceGene
AGhsA111209; AGhsB080803;
Affymetrix
GeneChip
HG-Focus
NA
HG-U133
203794_at; 213595_s_at;
HG-U133A
203794_at; 213595_s_at;
HG-U133A_2
203794_at; 213595_s_at;
HG-U133B
NA
HG-U133_Plus_2
203794_at; 213595_s_at;
HG-U95
32206_at;
HG-U95A
32206_at;
HG-U95B
NA
HG-U95C
NA
HG-U95D
NA
HG-U95E
NA
HG-U95Av2
NA
HuEx-1_0
2383427; 2383429; 2383430; 2383431; 2459045; 2459046; 2459047; 2459048; 2459049; 2459050; 2459051; 2459055; 2459059; 2459060; 2459061; 2459062; 2459063; 2459064; 2459065; 2459066; 2459067; 2459068; 2459069; 2459070; 2459071; 2459072; 2459074; 2459076; 2459077; 2459080; 2459082; 2459095; 2459097; 2459098; 2459099; 2459100; 3987200;
HuGeneFL
NA
Agilent
Human 1A Oligo Microarray:PGID215
NA
Whole Human Genome Oligo Microarray:PGID247
A_23_P51394; A_24_P205458; A_24_P944299;
Related H-InvDB links
H-ANGEL;
DNAProbeLocator
;
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
80 .. 80
A/C
rs77122651
-
CDS
Nonsynonymous[Ile27Leu]
115 .. 115
G/T
rs142030346
-
CDS
Synonymous[Gly38Gly]
223 .. 223
G/A
rs200154961
-
CDS
Synonymous[Ala74Ala]
258 .. 258
C/T
rs144801895
-
CDS
Nonsynonymous[Ser86Leu]
259 .. 259
G/A
rs35017425
-
CDS
Synonymous[Ser86Ser]
295 .. 295
C/T
rs137890180
-
CDS
Synonymous[Ile98Ile]
305 .. 305
T/C
rs200668164
-
CDS
Synonymous[Leu102Leu]
341 .. 341
T/A
rs199653014
-
CDS
Nonsynonymous[Cys114Ser]
363 .. 363
A/C
rs200440295
-
CDS
Nonsynonymous[Lys121Thr]
379 .. 379
A/G
rs199733498
-
CDS
Synonymous[Leu126Leu]
391 .. 391
C/T
rs55845581
-
CDS
Synonymous[Ile130Ile]
519 .. 519
A/G
rs150700769
-
CDS
Nonsynonymous[Asp173Gly]
573 .. 573
G/C
rs199543596
-
CDS
Nonsynonymous[Gly191Ala]
597 .. 597
G/A
rs140416725
-
CDS
Nonsynonymous[Arg199His]
604 .. 604
T/C
rs113402500
-
CDS
Synonymous[Thr201Thr]
630 .. 630
C/T
rs202057695
-
CDS
Nonsynonymous[Thr210Ile]
686 .. 686
G/A
rs112933697
-
CDS
Nonsynonymous[Gly229Ser]
737 .. 737
A/G
rs142183701
-
CDS
Nonsynonymous[Lys246Glu]
768 ^ 769
-/A
rs35357574
-
CDS
802 .. 802
G/A
rs35369012
-
CDS
Synonymous[Gln267Gln]
810 .. 810
T/C
rs200344808
-
CDS
Nonsynonymous[Ile270Thr]
1006 .. 1006
C/T
rs201643732
-
CDS
Synonymous[Val335Val]
1010 .. 1010
G/A
rs56219089
-
CDS
Nonsynonymous[Ala337Thr]
1048 .. 1048
C/T
rs149978094
-
CDS
Synonymous[Pro349Pro]
1072 .. 1072
C/T
rs200331694
-
CDS
Synonymous[Ser357Ser]
1176 .. 1176
T/-
rs67003899
-
CDS
1193 .. 1193
A/G
rs181637825
-
CDS
Nonsynonymous[Arg398Gly]
1200 .. 1200
G/A
rs961490
-
CDS
Nonsynonymous[Arg400His]
1362 .. 1362
A/G
rs201692012
-
CDS
Nonsynonymous[Asn454Ser]
1394 .. 1394
A/T
rs200594653
-
CDS
Nonsynonymous[Asn465Tyr]
1465 .. 1465
T/C
rs180784576
-
CDS
Synonymous[Asp488Asp]
1477 .. 1477
C/T
rs189930745
-
CDS
Synonymous[Thr492Thr]
1517 .. 1517
G/A/C/T
rs1929860
+
CDS
1536 .. 1536
G/A
rs200056759
-
CDS
Nonsynonymous[Arg512His]
1577 .. 1577
C/G
rs201775243
-
CDS
Nonsynonymous[Gln526Glu]
1614 .. 1614
G/A
rs200051797
-
CDS
Nonsynonymous[Arg538His]
1630 .. 1630
A/G
rs1929861
+
CDS
Synonymous[Lys543Lys]
1639 .. 1639
A/G
rs200690739
-
CDS
Synonymous[Gln546Gln]
1643 .. 1643
C/A
rs149240330
-
CDS
Nonsynonymous[Pro548Thr]
1667 .. 1667
A/G
rs146203858
-
CDS
Nonsynonymous[Ile556Val]
1737 .. 1737
A/-
rs66656566
-
CDS
1745 .. 1745
A/G
rs200486377
-
CDS
Nonsynonymous[Ser582Gly]
1811 .. 1811
G/A
rs183857756
-
CDS
Nonsynonymous[Ala604Thr]
1813 .. 1813
A/G
rs199656326
-
CDS
Synonymous[Ala604Ala]
1916 .. 1916
G/T
rs147617327
-
CDS
Nonsynonymous[Ala639Ser]
1929 .. 1929
C/G
rs142464333
-
CDS
Nonsynonymous[Ser643Cys]
1957 .. 1957
G/A
rs142853761
-
CDS
Synonymous[Ser652Ser]
1974 .. 1974
C/T
rs55687355
-
CDS
Nonsynonymous[Ala658Val]
1997 .. 1997
T/C
rs112426338
-
CDS
Nonsynonymous[Ser666Pro]
2049 .. 2049
A/G
rs146136586
-
CDS
Nonsynonymous[Asn683Ser]
2103 .. 2103
A/T
rs56229267
-
CDS
Nonsynonymous[Lys701Ile]
2106 .. 2106
A/G
rs139110633
-
CDS
Nonsynonymous[Asn702Ser]
2196 .. 2196
G/A
rs201852267
-
CDS
Nonsynonymous[Arg732His]
2249 .. 2249
C/T
rs12561938
-
CDS
Synonymous[Leu750Leu]
2315 .. 2315
A/G
rs200918078
-
CDS
Nonsynonymous[Met772Val]
2344 .. 2344
G/C
rs55848092
-
CDS
Synonymous[Leu781Leu]
2347 .. 2347
A/G
rs141188296
-
CDS
Synonymous[Lys782Lys]
2387 .. 2387
C/G
rs116416229
-
CDS
Nonsynonymous[His796Asp]
2395 .. 2395
C/T
rs187224217
-
CDS
Synonymous[Ser798Ser]
2413 .. 2413
G/A
rs145540185
-
CDS
Synonymous[Pro804Pro]
2486 .. 2486
C/T
rs149721518
-
CDS
Nonsynonymous[Pro829Ser]
2599 .. 2599
A/G
rs145724581
-
CDS
Synonymous[Pro866Pro]
2603 .. 2603
A/G
rs199675358
-
CDS
Nonsynonymous[Ile868Val]
2606 .. 2606
A/G
rs2297417
+
CDS
Nonsynonymous[Thr869Ala]
2615 .. 2615
C/T
rs148881297
-
CDS
Nonsynonymous[Arg872Cys]
2644 .. 2644
T/C
rs150430697
-
CDS
Synonymous[Ala881Ala]
2671 .. 2671
C/T
rs16846779
-
CDS
Synonymous[Ser890Ser]
2686 .. 2686
C/T
rs147810081
-
CDS
Synonymous[Ser895Ser]
2738 .. 2738
A/G
rs145538584
-
CDS
Nonsynonymous[Met913Val]
2763 .. 2763
T/C
rs200692909
-
CDS
Nonsynonymous[Leu921Ser]
2770 .. 2770
T/C
rs1045247
+
CDS
Synonymous[Ser923Ser]
2803 .. 2803
G/A
rs201963139
-
CDS
Synonymous[Ala934Ala]
2816 .. 2816
A/G
rs143404397
-
CDS
Nonsynonymous[Lys939Glu]
2833 .. 2833
T/C
rs147437313
-
CDS
Synonymous[Ser944Ser]
2835 .. 2835
C/T
rs148249654
-
CDS
Nonsynonymous[Pro945Leu]
2879 ^ 2880
-/C
rs67581567
-
CDS
2889 .. 2889
T/C
rs2802269
-
CDS
Nonsynonymous[Val963Ala]
2898 .. 2898
G/A
rs145018031
-
CDS
Nonsynonymous[Arg966Gln]
2910 .. 2910
G/T
rs146538430
-
CDS
Nonsynonymous[Ser970Ile]
2918 .. 2918
C/T
rs140582350
-
CDS
Synonymous[Leu973Leu]
2940 .. 2940
G/A
rs142402392
-
CDS
Nonsynonymous[Ser980Asn]
2950 .. 2950
G/A
rs56027641
-
CDS
Synonymous[Pro983Pro]
2976 .. 2976
T/C
rs3795452
-
3'UTR
2977 .. 2977
C/T
rs200292265
-
3'UTR
2984 .. 2984
C/T
rs144798693
-
3'UTR
2999 .. 2999
G/A
rs3795451
-
3'UTR
3062 .. 3062
T/C
rs3795450
-
3'UTR
3084 .. 3084
A/C
rs3795449
-
3'UTR
3105 .. 3105
G/A
rs186210023
-
3'UTR
3260 .. 3260
C/T
rs182064499
-
3'UTR
3319 .. 3319
A/T
rs76236428
-
3'UTR
3367 .. 3367
T/C
rs1045252
+
3'UTR
3368 .. 3368
G/C/CC/TG
rs1062908
+
3'UTR
3368 .. 3368
G/C
rs41314928
+
3'UTR
3386 .. 3386
C/A
rs35189169
-
3'UTR
3435 ^ 3436
-/G
rs35409537
-
3'UTR
3444 .. 3444
T/C
rs15425
+
3'UTR
3461 .. 3461
C/T
rs190446902
-
3'UTR
3483 .. 3483
T/A
rs1801784
+
3'UTR
3536 .. 3536
C/T
rs186460615
-
3'UTR
3645 .. 3645
C/T
rs182042929
-
3'UTR
3875 .. 3875
T/A
rs149839514
-
3'UTR
3940 .. 3940
G/A
rs139998015
-
3'UTR
3941 .. 3941
A/G
rs3795446
-
3'UTR
3975 .. 3975
T/G
rs3795445
-
3'UTR
3981 ^ 3982
-/G
rs35600383
-
3'UTR
4064 .. 4064
A/G
rs1801783
+
3'UTR
4117 .. 4117
T/C
rs113604509
-
3'UTR
4212 .. 4212
G/A
rs141866072
-
3'UTR
4273 ^ 4274
-/C
rs34133198
-
3'UTR
4424 .. 4424
A/G
rs77506278
-
3'UTR
4515 .. 4515
C/G
rs189444419
-
3'UTR
4632 .. 4632
C/T
rs138298781
-
3'UTR
4688 .. 4688
G/A
rs184630947
-
3'UTR
4848 .. 4848
T/C
rs16846772
-
3'UTR
5047 .. 5047
T/G
rs12741503
-
3'UTR
5061 .. 5061
C/T
rs146341950
-
3'UTR
5093 .. 5093
G/C
rs117021021
-
3'UTR
5095 .. 5095
C/T
rs75106495
-
3'UTR
5179 .. 5179
T/C
rs61833998
-
3'UTR
5264 ^ 5265
-/C
rs34760775
-
3'UTR
5546 .. 5546
G/A
rs2997438
+
3'UTR
5607 .. 5607
G/A
rs138647710
-
3'UTR
5642 .. 5642
G/A
rs143132234
-
3'UTR
5648 .. 5648
G/A
rs149100908
-
3'UTR
5672 .. 5672
T/G
rs111997356
-
3'UTR
5674 .. 5674
G/A
rs138108319
-
3'UTR
5727 .. 5727
C/T
rs150296308
-
3'UTR
5728 .. 5728
G/A
rs180751392
-
3'UTR
5768 .. 5768
C/G
rs115381746
-
3'UTR
5801 .. 5801
G/A
rs189941160
-
3'UTR
5850 .. 5850
C/T
rs1045285
+
3'UTR
5857 .. 5857
A/G
rs3768431
-
3'UTR
5867 .. 5867
C/A
rs1045286
+
3'UTR
5942 .. 5942
A/G
rs1045287
+
3'UTR
5956 .. 5956
C/T
rs2989946
+
3'UTR
6078 .. 6078
T/C
rs72762309
-
3'UTR
6111 .. 6111
T/C
rs59349491
-
3'UTR
6189 .. 6189
A/C
rs184569762
-
3'UTR
6191 .. 6191
G/A
rs1045289
+
3'UTR
6204 .. 6204
T/C
rs1045290
+
3'UTR
6325 .. 6325
G/A
rs192136646
-
3'UTR
6380 .. 6380
G/T
rs113129804
-
3'UTR
6441 .. 6441
C/T
rs147775745
-
3'UTR
6446 .. 6446
A/G
rs74912293
-
3'UTR
6584 .. 6584
A/G
rs115092897
-
3'UTR
6686 .. 6686
C/G
rs187516567
-
3'UTR
6707 .. 6707
C/G
rs184320519
-
3'UTR
6718 .. 6718
C/T
rs79812796
-
3'UTR
6719 .. 6719
G/A
rs144277377
-
3'UTR
6769 .. 6769
T/C
rs11549694
-
3'UTR
6777 .. 6777
T/C
rs3768425
-
3'UTR
6817 .. 6817
C/G
rs142069826
-
3'UTR
6898 .. 6898
C/T
rs151290005
-
3'UTR
6919 .. 6919
G/T
rs192620915
-
3'UTR
7018 ^ 7019
-/GTT
rs80259012
-
3'UTR
7019 ^ 7020
-/TGT/TG
rs67424708
-
3'UTR
7020 ^ 7021
-/TGT
rs3835713
-
3'UTR
7021 .. 7021
A/T
rs201600801
-
3'UTR
7171 .. 7171
T/A
rs1186
-
3'UTR
7202 .. 7202
T/C
rs142426953
-
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
MER5B
3697
3799
-
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;