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H-Invitational ID: HIT000005192 Accession number: AK021918 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Solute carrier family 52, riboflavin transporter, member 2; Porcine endogenous retrovirus A receptor 1; PERV-A receptor 1; Protein GPR172A; Riboflavin transporter 3; hRFT3;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
23 .. 23 C/G rs113099131 + 5'UTR
26 .. 26 G/A rs144713518 + 5'UTR
60 .. 60 C/T rs187464121 + 5'UTR
72 .. 72 C/A rs115940535 + 5'UTR
185 .. 185 G/A rs11546260 + 5'UTR
315 .. 315 C/T rs11546258 + 5'UTR
405 .. 405 C/T rs148535877 + 5'UTR
472 .. 472 T/C rs146942171 + CDS Synonymous[Arg8Arg]
497 .. 497 G/T rs138010981 + CDS Nonsynonymous[Ala17Ser]
531 .. 531 A/G rs141698844 + CDS Nonsynonymous[Asn28Ser]
532 .. 532 T/C rs200102613 + CDS Synonymous[Asn28Asn]
605 .. 605 G/C rs150137023 + CDS Nonsynonymous[Val53Leu]
626 .. 626 C/T rs201213634 + CDS Synonymous[Leu60Leu]
640 .. 640 G/C rs201246554 + CDS Synonymous[Val64Val]
676 .. 676 C/T rs111588500 + CDS Synonymous[Asp76Asp]
757 .. 757 C/T rs146256291 + CDS Synonymous[Ala103Ala]
801 .. 801 C/A rs117500243 + CDS Nonsynonymous[Ala118Asp]
807 .. 807 T/C rs74445699 + CDS Nonsynonymous[Val120Ala]
818 .. 818 G/T rs146274588 + CDS Nonsynonymous[Ala124Ser]
819 .. 819 C/T rs200753132 + CDS Nonsynonymous[Ala124Val]
832 .. 832 G/A rs140003920 + CDS Synonymous[Ser128Ser]
858 .. 858 G/A rs199864300 + CDS Nonsynonymous[Ser137Asn]
926 .. 926 G/A rs141953803 + CDS Nonsynonymous[Val160Met]
946 .. 946 T/C rs146310658 + CDS Synonymous[Gly166Gly]
976 .. 976 C/T rs148530003 + CDS Synonymous[Pro176Pro]
982 .. 982 C/T rs142879103 + CDS Synonymous[Asn178Asn]
983 .. 983 G/A rs151081625 + CDS Nonsynonymous[Gly179Ser]
999 .. 999 C/A rs202232509 + CDS Nonsynonymous[Pro184Gln]
1003 .. 1003 C/T rs74370046 + CDS Synonymous[Leu185Leu]
1016 .. 1016 C/T rs201705744 + CDS Nonsynonymous[Arg190Cys]
1046 .. 1046 C/T rs200455766 + CDS Synonymous[Leu200Leu]
1054 .. 1054 C/T rs187632310 + CDS Synonymous[Ala202Ala]
1061 .. 1061 G/A rs144883729 + CDS Nonsynonymous[Val205Ile]
1091 .. 1091 C/T rs147954962 + CDS Synonymous[Leu215Leu]
1105 .. 1105 G/A rs141909863 + CDS Synonymous[Pro219Pro]
1228 .. 1228 C/T rs200533281 + CDS Synonymous[Thr260Thr]
1270 .. 1270 C/A rs145009003 + CDS Synonymous[Ala274Ala]
1272 .. 1272 G/A rs144912258 + CDS Nonsynonymous[Arg275His]
1366 .. 1366 G/A rs149050347 + CDS Synonymous[Gly306Gly]
1368 .. 1368 G/A rs143091206 + CDS Nonsynonymous[Arg307His]
1464 .. 1464 T/C rs148234606 + CDS Nonsynonymous[Leu339Pro]
1465 .. 1465 G/C rs140307485 + CDS Synonymous[Leu339Leu]
1487 .. 1487 G/A rs145502954 + CDS Nonsynonymous[Val347Met]
1513 .. 1513 G/T rs200618841 + CDS Synonymous[Ala355Ala]
1514 .. 1514 C/T rs138107380 + CDS Synonymous[Leu356Leu]
1522 .. 1522 C/T rs142697341 + CDS Synonymous[Val358Val]
1537 .. 1537 G/A rs146292053 + CDS Synonymous[Pro363Pro]
1554 .. 1554 C/T rs138160033 + CDS Nonsynonymous[Ser369Leu]
1561 .. 1561 G/A rs149575570 + CDS Synonymous[Gly371Gly]
1564 .. 1564 C/G rs200631895 + CDS Synonymous[Val372Val]
1566 .. 1566 T/G rs200245353 + CDS Nonsynonymous[Val373Gly]
1570 .. 1570 C/T rs144290224 + CDS Synonymous[Leu374Leu]
1611 .. 1611 A/G rs148754028 + CDS Nonsynonymous[Tyr388Cys]
1645 .. 1645 C/T rs144821688 + CDS Synonymous[Gly399Gly]
1675 .. 1675 C/T rs147518188 + CDS Synonymous[Gly409Gly]
1687 .. 1687 G/A rs140177553 + CDS Synonymous[Gln413Gln]
1705 .. 1705 C/T rs199767089 + CDS Synonymous[Gly419Gly]
1725 .. 1725 C/T rs201673476 + CDS Nonsynonymous[Pro426Leu]
1741 .. 1741 C/T rs184190914 + CDS Synonymous[His431His]
1742 .. 1742 G/A rs202178971 + CDS Nonsynonymous[Val432Met]
1768 .. 1768 A/G rs189845609 + CDS Synonymous[Ala440Ala]
1769 .. 1769 G/T rs75165898 + CDS Nonsynonymous[Asp441Tyr]
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer