H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000012894
Accession number:
AK056280
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Conserved hypothetical protein.
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
63 .. 63
A/G
rs12759699
-
5'UTR
220 .. 220
A/T
rs144659800
-
5'UTR
222 .. 222
A/G
rs140936167
-
5'UTR
496 .. 496
T/A
rs116048422
-
5'UTR
535 .. 535
A/G
rs144886763
-
5'UTR
630 .. 630
C/A
rs60121043
-
5'UTR
666 .. 666
A/G
rs12569049
-
5'UTR
751 .. 751
T/C
rs186082548
-
5'UTR
776 .. 776
T/C
rs150299178
-
5'UTR
787 .. 787
G/A
rs16853672
-
5'UTR
823 .. 823
C/G
rs4651014
-
5'UTR
878 .. 878
G/T
rs151121632
-
5'UTR
896 .. 896
A/G
rs4651013
-
5'UTR
947 .. 947
C/T
rs181292776
-
5'UTR
987 .. 987
G/A
rs189692933
-
5'UTR
1134 .. 1134
G/A
rs3829794
-
CDS
Nonsynonymous[Ser19Asn]
1238 .. 1238
C/T
rs75390485
-
CDS
Nonsynonymous[Pro54Ser]
1381 .. 1381
A/C
rs141734152
-
3'UTR
1382 .. 1382
A/T
rs184431230
-
3'UTR
1543 .. 1543
G/T
rs181004855
-
3'UTR
1567 .. 1567
G/A
rs78206228
-
3'UTR
1589 .. 1589
G/A
rs188091596
-
3'UTR
1604 .. 1604
C/T
rs144717721
-
3'UTR
1648 .. 1648
C/A
rs116676084
-
3'UTR
1741 .. 1741
T/A
rs148754852
-
3'UTR
1750 .. 1750
C/T
rs144208966
-
3'UTR
1788 .. 1788
G/A
rs184844560
-
3'UTR
1931 .. 1931
A/T
rs192470920
-
3'UTR
1944 .. 1944
A/C
rs1325194
+
3'UTR
1993 .. 1993
G/C
rs187364738
-
3'UTR
1997 .. 1997
T/C
rs4651012
-
3'UTR
2070 .. 2070
G/C
rs115727481
-
3'UTR
2079 .. 2079
A/G
rs149984339
-
3'UTR
2106 .. 2106
T/C
rs1325195
+
3'UTR
2132 .. 2132
C/T
rs184192725
-
3'UTR
2147 .. 2147
A/G
rs192732952
-
3'UTR
2308 .. 2308
G/A
rs139185338
-
3'UTR
2426 .. 2426
C/T
rs150802921
-
3'UTR
2427 .. 2427
G/A
rs141891067
-
3'UTR
2473 .. 2473
T/C
rs188159185
-
3'UTR
2515 .. 2515
G/A
rs138653896
-
3'UTR
2676 .. 2676
T/C
rs199965966
-
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
MIRb
445
610
+
MIRb
804
963
-
MIRc
1264
1341
+
AluY
2417
2695
+
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;