H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000015365_02 Accession number: AK090498 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to N-acetylserotonin O-methyltransferase-like protein isoform 3.
 
 

Transcript original information
Accession number AK090498.1
CAGE tag ID NA
EST ID NA
Clone Number ADRGL2003017
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (ASMTL) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (ASMTL);
Sequence data provider Project:FLJ; Provider:FLJ/HRI; 
Annotation project H-Invitational FLcDNA
Length of cDNA 2035[bp] (No. of exon:12)[A:425 T:362 G:660 C:588]
Devision NA
Molecular type NA
Library origin Cell type NA
Tissue type adrenal gland
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) NA
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0159613
Genomic location  G-integra Help Chromosome Y
Location Yp11.32
Position 1472034- 1521822
Strand -
Possible duplicated location(s) HIX0016625; 
Gene structure 12 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:8623
KEGG GENES KEGG GENES(8623)
GeneCard GeneCardASMTL*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000111737
Predicted CDS 90..1907;  605[aa];  Orientation:+3; 
Codon Adaptation Index (CAI). 0.816
Database links RefSeq NP_001166945
UniProt NA
CCDS CCDS55363CCDS55363

Motif information
ORF

length(605),orf(90:1907)
MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKAS
FATPYGYAMETAKQKALEVANRLYQTVGGLILEKPVDKQDAYRMLSRLSG
REHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHS
GEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPR
PEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAG
QATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDE
APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLA
SDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQD
AYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALA
RELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLP
SAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVA
QRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILA
TKVAP*
a.a.
length
InterPro Name
length(183), motif(12:194) 183 IPR029001 Inosine triphosphate pyrophosphatase-like [Family]
length(183), motif(13:195) 183 IPR029001 Inosine triphosphate pyrophosphatase-like [Family]
length(180), motif(13:192) 180 IPR003697 Maf-like protein [Family]
length(182), motif(14:195) 182 IPR003697 Maf-like protein [Family]
length(77), motif(269:345) 77 IPR011991 Winged helix-turn-helix DNA-binding domain [Domain]
length(243), motif(336:578) 243 IPR001077 O-methyltransferase, family 2 [Domain]
length(251), motif(352:602) 251 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase [Domain]
length(242), motif(353:594) 242 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase [Domain]

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000015365_02
H-Inv cluster ID Locus viewHIX0159613
Accession number AK090498.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO;  Splicing isoformSplicing isoform
Coding potential  Help Protein coding; 
Definition Similar to N-acetylserotonin O-methyltransferase-like protein isoform 3.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001166945)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Experimental evidence Protein evidence
PubMed ID NA
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ASMTL
HGNC aliases NA
HGNC name acetylserotonin O-methyltransferase-like
DDBJ NA
UniProt NA
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000111737
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:8623
KEGG GENES KEGG GENES(8623)
GeneCard GeneCardASMTL*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA

Gene ontology information
Molecular function O-methyltransferase activity (GO:0008171); 
Cellular component cytoplasm (GO:0005737); 

Subcellular localization information  Last modified:27-May-2015
WoLF PSORT mitochondria;  cytosol;  nuclear; 
Target P Not predicted
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.