H-InvDB_9.0 released on May 27, 2015.
Search by
Keyword
H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
H-Inv gene family/group (HIF)
Accession number
Chromosome number
Chromosome band
Definition*
Data source ID
---
CCDS ID
dbSNP ID (rs number)
EC number
Ensembl ID
EntrezGene ID
FR ID
FR Accession number
GO ID
GO name*
HGNC gene symbol
HGNC gene name*
InterPro ID
InterPro name*
OMIM ID
OMIM title*
Pathway ID
Pathway name*
RefSeq (gene) ID
RefSeq (protein) ID
SCOP ID
UniProt
for
Advanced Search
Home
Quick guide
Navi
BLAST
Site map
Download
Contact us
Help
H-Invitational ID:
HIT000015365_02
Accession number:
AK090498
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to N-acetylserotonin O-methyltransferase-like protein isoform 3.
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Transcript original information
Accession number
AK090498.1
CAGE tag ID
NA
EST ID
NA
Clone Number
ADRGL2003017
Experimental resources
NBRC
;
HGPD
;
Antibody (ASMTL)
;
Catalog (ASMTL)
;
Sequence data provider
Project:FLJ; Provider:FLJ/HRI;
Annotation project
H-Invitational FLcDNA
Length of cDNA
2035[bp] (No. of exon:12)[A:425 T:362 G:660 C:588]
Devision
NA
Molecular type
NA
Library origin
Cell type
NA
Tissue type
adrenal gland
Develpmental stage
NA
Sequence quality information
CDS feature
Complete CDS
Kozak sequence
NA
PolyA
NA
Vector/adapter sequence
NA
Frame shift
NA
Remaining intron
NA
Splice site acceptor (NAGNAG)
NA
Transcript quality feature
NA
Notes
NA
CTGGCCGCCTGTTTTTTTTGCAGCCGCGCTGCGCGCACCGCGGGCTCCGG GCTCAGAAGTGCGGACGCCCGGCTCCCGGCGTGGACGCCATGGTGCTGTG CCCGGTGATTGGGAAGCTGCTGCACAAGCGCGTGGTGCTGGCCAGCGCCT CCCCACGCCGTCAGGAGATCCTCAGCAACGCGGGTCTCAGGTTTGAGGTG GTCCCCTCCAAGTTTAAAGAGAAGCTGGACAAAGCCTCCTTCGCTACTCC GTATGGGTACGCCATGGAGACCGCCAAGCAGAAGGCCCTGGAGGTGGCCA ACCGGCTGTACCAGACAGTCGGGGGGCTGATTCTGGAGAAGCCGGTGGAC AAGCAGGACGCCTACAGGATGCTGTCCCGGTTGAGTGGGAGAGAACACAG CGTGTTCACAGGTGTCGCGATCGTCCACTGCTCCAGCAAAGACCATCAGC TGGACACCAGGGTCTCGGAATTCTACGAGGAAACGAAGGTGAAGTTCTCG GAGCTGTCCGAGGAGCTGCTCTGGGAATACGTCCACAGCGGGGAGCCCAT GGACAAAGCTGGCGGCTACGGGATCCAGGCCCTGGGCGGCATGCTGGTGG AGTCCGTACACGGGGACTTTCTGAACGTGGTGGGATTCCCGCTGAACCAC TTCTGCAAGCAGCTGGTGAAGCTCTACTACCCGCCCCGCCCGGAGGACCT GCGGCGGAGTGTCAAGCACGACTCCATCCCGGCCGCGGACACCTTCGAAG ACCTCAGTGACGTGGAGGGGGGTGGCTCGGAGCCCACTCAGAGGGACGCG GGCAGCCGCGATGAGAAGGCCGAGGCGGGAGAGGCGGGACAGGCCACGGC AGAGGCTGAGTGTCACAGGACTCGGGAGACCCTGCCTCCGTTCCCGACAC GCCTCCTGGAGCTGATTGAGGGCTTTATGCTATCCAAGGGCCTGCTCACC GCTTGCAAACTGAAGGTGTTCGATTTGTTAAAAGATGAAGCACCCCAGAA GGCTGCGGATATTGCCAGCAAAGTGGACGCCTCTGCGTGTGGAATGGAGA GGCTTCTGGACATCTGTGCTGCCATGGGGCTCCTGGAGAAGACAGAGCAA GGTTACAGTAACACAGAGACAGCGAACGTCTACCTGGCATCGGATGGCGA ATACTCTCTGCACGGCTTCATCATGCACAATAATGACCTCACATGGAACC TCTTTACATACCTGGAGTTTGCCATCCGAGAGGGAACAAACCAGCACCAC AGGGCGTTGGGGAAGAAGGCGGAAGATCTGTTCCAGGATGCGTACTACCA GAGCCCGGAGACGCGGCTGAGGTTCATGCGGGCCATGCACGGCATGACGA AGCTGACTGCGTGCCAGGTGGCCACGGCCTTCAATCTGTCCCGCTTCTCC TCCGCCTGCGACGTGGGAGGCTGCACCGGTGCACTGGCCCGAGAGCTGGC CCGTGAGTACCCTCGTATGCAGGTGACTGTGTTTGACCTCCCAGACATTA TCGAGCTGGCCGCCCACTTCCAACCCCCCGGACCGCAGGCAGTGCAGATC CACTTCGCAGCAGGTGACTTTTTCAGGGACCCCCTCCCCAGCGCTGAGCT GTACGTCCTGTGCCGGATCCTGCATGACTGGCCAGACGACAAAGTCCACA AGTTACTCAGCAGGGTCGCCGAGAGCTGCAAGCCAGGGGCCGGCCTGCTG CTGGTGGAGACGCTCCTGGATGAGGAGAAGAGGGTGGCGCAGCGCGCCCT GATGCAGTCACTGAACATGCTGGTGCAGACTGAAGGCAAGGAGCGGAGCC TGGGCGAGTATCAGTGCTTGCTGGAGCTGCACGGCTTCCACCAGGTGCAG GTGGTGCACTTGGGGGGTGTCCTGGATGCCATCTTGGCCACCAAAGTGGC CCCCTGAAGCCCAGGCAGCATGTTCATTATAGGGATGTCCTCCCCCAGGC TGCAGGTGGACCGCCCGGTCCCCAAGTACCATAGGACAGTCACATAGGAG CGTGTAGTCGTGACTGAATAAAGAAAGCAAAAGCC
Gene structure information
H-Inv cluster ID
HIX0159613
Genomic location
Chromosome
Y
Location
Yp11.32
Position
1472034- 1521822
Strand
-
Possible duplicated location(s)
HIX0016625;
Gene structure
12 exon(s)
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:8623
;
KEGG GENES
KEGG GENES(8623)
;
GeneCard
ASMTL
;
*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome alignment
;
Predicted CDS information
HIP ID
HIP000111737
Predicted CDS
90..1907; 605[aa]; Orientation:+3;
Codon Adaptation Index (CAI).
0.816
Database links
RefSeq
NP_001166945
;
UniProt
NA
CCDS
CCDS55363
;
CCDS55363
;
MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKAS FATPYGYAMETAKQKALEVANRLYQTVGGLILEKPVDKQDAYRMLSRLSG REHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHS GEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPR PEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAG QATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDE APQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLA SDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQD AYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALA RELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLP SAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVA QRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILA TKVAP*
Motif information
a.a.
length
InterPro
Name
183
IPR029001
Inosine triphosphate pyrophosphatase-like [Family]
183
IPR029001
Inosine triphosphate pyrophosphatase-like [Family]
180
IPR003697
Maf-like protein [Family]
182
IPR003697
Maf-like protein [Family]
77
IPR011991
Winged helix-turn-helix DNA-binding domain [Domain]
243
IPR001077
O-methyltransferase, family 2 [Domain]
251
IPR029063
S-adenosyl-L-methionine-dependent methyltransferase [Domain]
242
IPR029063
S-adenosyl-L-methionine-dependent methyltransferase [Domain]
Gene function information
H-Inv ID
HIT000015365_02
H-Inv cluster ID
HIX0159613
Accession number
AK090498.1
CAGE tag ID
NA
EST ID
NA
Transcript feature
NO;
Splicing isoform
Coding potential
Protein coding;
Definition
Similar to N-acetylserotonin O-methyltransferase-like protein isoform 3.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_001166945
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Experimental evidence
Protein evidence
PubMed ID
NA
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
ASMTL
HGNC aliases
NA
HGNC name
acetylserotonin O-methyltransferase-like
DDBJ
NA
UniProt
NA
EC number
NA
GGDB
(GlycoGene Database)
Gene symbol
NA
Familly
NA
Designation
NA
Expression
NA
KEGG metabolic pathway
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000111737
No. of interaction
NA
Interaction partner(s)
NA
BIND
NA
DIP
NA
MINT
NA
HPRD
NA
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:8623
;
KEGG GENES
KEGG GENES(8623)
;
GeneCard
ASMTL
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA
Related H-InvDB links
Gene family;
Similarity Search Tool;
TACT
;
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.
NA
Gene ontology information
Molecular function
O-methyltransferase activity (
GO:0008171
);
Cellular component
cytoplasm (
GO:0005737
);
Subcellular localization information
Last modified:27-May-2015
WoLF PSORT
mitochondria; cytosol; nuclear;
Target P
Not predicted
SOSUI
soluble protein
TMHMM
soluble protein
PTS1
Not targeted
Related H-InvDB links
LIFEdb;
JRE-1.4.0 or later is required.
Download JRE at
Sun's web site.