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H-Invitational ID: HIT000025366 Accession number: AL136770 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Claudin-12;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
13 .. 13 C/A rs143733597 + 5'UTR
85 .. 85 C/T rs116804658 + 5'UTR
153 .. 153 C/G rs185475099 + 5'UTR
202 .. 202 G/T rs200372770 + CDS Nonsynonymous[Arg4Leu]
203 .. 203 G/T rs201163165 + CDS Synonymous[Arg4Arg]
323 .. 323 C/T rs140108357 + CDS Synonymous[Asn44Asn]
377 .. 377 C/T rs17862175 + CDS Synonymous[Asp62Asp]
378 .. 378 G/A rs200164858 + CDS Nonsynonymous[Gly63Arg]
401 .. 401 C/T rs185427290 + CDS Synonymous[Tyr70Tyr]
422 .. 422 A/G rs200281270 + CDS Synonymous[Ser77Ser]
483 .. 483 A/G rs76988207 + CDS Nonsynonymous[Met98Val]
506 .. 506 G/T rs79632494 + CDS Synonymous[Leu105Leu]
539 .. 539 G/A rs34378679 - CDS Synonymous[Ser116Ser]
556 .. 556 T/A rs146056566 + CDS Nonsynonymous[Leu122Gln]
664 .. 664 A/G rs139669349 + CDS Nonsynonymous[Asn158Ser]
744 .. 744 C/T rs149798695 + CDS Synonymous[Leu185Leu]
770 .. 770 T/G rs144717277 + CDS Nonsynonymous[Phe193Leu]
785 .. 785 A/T rs148668482 + CDS Synonymous[Thr198Thr]
791 .. 791 A/G rs142157384 + CDS Synonymous[Lys200Lys]
858 .. 858 C/T rs189780617 + CDS Nonsynonymous[Pro223Ser]
867 .. 867 G/A rs147857522 + CDS Nonsynonymous[Ala226Thr]
870 .. 870 C/T rs141430153 + CDS Nonsynonymous[Arg227Cys]
892 .. 892 A/C rs145275926 + CDS Nonsynonymous[Glu234Ala]
958 .. 958 C/A rs182726869 + 3'UTR
966 .. 966 C/G rs147269114 + 3'UTR
1008 .. 1008 C/T rs140861444 + 3'UTR
1058 .. 1058 T/G rs3810874 - 3'UTR
1065 .. 1065 G/A rs187870115 + 3'UTR
1191 .. 1191 C/T rs191882778 + 3'UTR
1297 .. 1297 T/C rs183250663 + 3'UTR
1303 .. 1303 A/T rs17865130 + 3'UTR
1383 .. 1383 G/A rs1017104 + 3'UTR
1505 .. 1505 T/C rs1017105 + 3'UTR
1515 .. 1515 T/C rs1017106 + 3'UTR
1878 .. 1878 C/T rs193147106 + 3'UTR
2066 .. 2066 C/T rs142246998 + 3'UTR
2070 .. 2070 G/A rs11563542 + 3'UTR
2172 .. 2172 C/T rs151249770 + 3'UTR
2349 .. 2349 C/T rs17861306 + 3'UTR
2363 .. 2363 T/C rs34833025 + 3'UTR
2524 .. 2524 T/C rs17867644 + 3'UTR
2758 .. 2758 C/T rs1048881 + 3'UTR
2759 .. 2759 C/T rs1048882 + 3'UTR
2800 .. 2800 A/G rs184613376 + 3'UTR
2843 .. 2843 G/T rs1048883 + 3'UTR
3011 .. 3011 A/G rs186714887 + 3'UTR
3039 .. 3039 A/G rs191175070 + 3'UTR
3146 .. 3146 G/A rs9731 - 3'UTR
3301 .. 3301 A/G rs17863096 + 3'UTR
3428 .. 3428 C/T rs184005906 + 3'UTR
3454 .. 3454 A/G rs17866176 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
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 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer