H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000025366
Accession number:
AL136770
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Claudin-12;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
13 .. 13
C/A
rs143733597
+
5'UTR
85 .. 85
C/T
rs116804658
+
5'UTR
153 .. 153
C/G
rs185475099
+
5'UTR
202 .. 202
G/T
rs200372770
+
CDS
Nonsynonymous[Arg4Leu]
203 .. 203
G/T
rs201163165
+
CDS
Synonymous[Arg4Arg]
323 .. 323
C/T
rs140108357
+
CDS
Synonymous[Asn44Asn]
377 .. 377
C/T
rs17862175
+
CDS
Synonymous[Asp62Asp]
378 .. 378
G/A
rs200164858
+
CDS
Nonsynonymous[Gly63Arg]
401 .. 401
C/T
rs185427290
+
CDS
Synonymous[Tyr70Tyr]
422 .. 422
A/G
rs200281270
+
CDS
Synonymous[Ser77Ser]
483 .. 483
A/G
rs76988207
+
CDS
Nonsynonymous[Met98Val]
506 .. 506
G/T
rs79632494
+
CDS
Synonymous[Leu105Leu]
539 .. 539
G/A
rs34378679
-
CDS
Synonymous[Ser116Ser]
556 .. 556
T/A
rs146056566
+
CDS
Nonsynonymous[Leu122Gln]
664 .. 664
A/G
rs139669349
+
CDS
Nonsynonymous[Asn158Ser]
744 .. 744
C/T
rs149798695
+
CDS
Synonymous[Leu185Leu]
770 .. 770
T/G
rs144717277
+
CDS
Nonsynonymous[Phe193Leu]
785 .. 785
A/T
rs148668482
+
CDS
Synonymous[Thr198Thr]
791 .. 791
A/G
rs142157384
+
CDS
Synonymous[Lys200Lys]
858 .. 858
C/T
rs189780617
+
CDS
Nonsynonymous[Pro223Ser]
867 .. 867
G/A
rs147857522
+
CDS
Nonsynonymous[Ala226Thr]
870 .. 870
C/T
rs141430153
+
CDS
Nonsynonymous[Arg227Cys]
892 .. 892
A/C
rs145275926
+
CDS
Nonsynonymous[Glu234Ala]
958 .. 958
C/A
rs182726869
+
3'UTR
966 .. 966
C/G
rs147269114
+
3'UTR
1008 .. 1008
C/T
rs140861444
+
3'UTR
1058 .. 1058
T/G
rs3810874
-
3'UTR
1065 .. 1065
G/A
rs187870115
+
3'UTR
1191 .. 1191
C/T
rs191882778
+
3'UTR
1297 .. 1297
T/C
rs183250663
+
3'UTR
1303 .. 1303
A/T
rs17865130
+
3'UTR
1383 .. 1383
G/A
rs1017104
+
3'UTR
1505 .. 1505
T/C
rs1017105
+
3'UTR
1515 .. 1515
T/C
rs1017106
+
3'UTR
1878 .. 1878
C/T
rs193147106
+
3'UTR
2066 .. 2066
C/T
rs142246998
+
3'UTR
2070 .. 2070
G/A
rs11563542
+
3'UTR
2172 .. 2172
C/T
rs151249770
+
3'UTR
2349 .. 2349
C/T
rs17861306
+
3'UTR
2363 .. 2363
T/C
rs34833025
+
3'UTR
2524 .. 2524
T/C
rs17867644
+
3'UTR
2758 .. 2758
C/T
rs1048881
+
3'UTR
2759 .. 2759
C/T
rs1048882
+
3'UTR
2800 .. 2800
A/G
rs184613376
+
3'UTR
2843 .. 2843
G/T
rs1048883
+
3'UTR
3011 .. 3011
A/G
rs186714887
+
3'UTR
3039 .. 3039
A/G
rs191175070
+
3'UTR
3146 .. 3146
G/A
rs9731
-
3'UTR
3301 .. 3301
A/G
rs17863096
+
3'UTR
3428 .. 3428
C/T
rs184005906
+
3'UTR
3454 .. 3454
A/G
rs17866176
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;