H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000026906
Accession number:
AL831994
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Transcript annotation summary
H-Inv ID
HIT000026906
H-Inv cluster ID
HIX0002273
H-Inv protein ID
HIP000163705
Accession number
AL831994.1
CAGE tag ID
NA
EST ID
NA
Genomic location
Chromosome
2
Location
2q11.2
Position
96940469- 96963425
Strand
-
Transcript feature
NO;
Coding potential
Protein coding;
Definition
Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
O75643
) [Identity/coverage = 99.658%/82.02%] to Homo sapiens (Human). protein.
Gene family / group
NA
Gene symbol/name
HGNC symbol
SNRNP200
HGNC aliases
"activating signal cointegrator 1 complex subunit 3-like 1", "retinitis pigmentosa 33 (autosomal dominant)"
HGNC name
small nuclear ribonucleoprotein 200kDa (U5)
DDBJ
NA
UniProt
SNRNP200
EC number
EC 3.6.4.13
RNA helicase;
KEGG metabolic pathway
NA
PubMed ID
8670905
;
9539711
;
9872452
;
11991638
;
12168954
;
14702039
;
15175327
;
15489334
;
16723661
;
16959974
;
17081983
;
18318008
;
18669648
;
18691976
;
19367720
;
19608861
;
19690332
;
19710410
;
19878916
;
20068231
;
21269460
;
21406692
;
21618346
;
23045696
;
ALL
;
Related H-InvDB links
Similarity Search Tool
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:23020
;
KEGG GENES
KEGG GENES(23020)
;
GeneCard
SNRNP200
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA