H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000029398 Accession number: BC000163 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Vimentin;
 
 

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000029398
H-Inv cluster ID Locus viewHIX0008682
Accession number BC000163.2
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Vimentin;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P08670)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Experimental evidence Protein evidence
PubMed ID 2251132232357924728763371665346717591509469175763112437871188903212458200147020391476210614996095151640541548933415592455158468441696424317081983179246791822033618669648186919761881194519270731196088611969033220068231201761122126946021406692214654802174688022119849ALL
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol VIM
HGNC aliases NA
HGNC name vimentin
DDBJ VIM
UniProt VIM
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000104161
No. of interaction 53
Interaction partner(s) HIP000014929HIP000022282HIP000024661HIP000026252HIP000026622HIP000028009HIP000031186HIP000034100HIP000035365HIP000035936HIP000036625HIP000036837HIP000036839HIP000036913HIP000036913HIP000037880HIP000039154HIP000039181HIP000039263HIP000039263HIP000045428HIP000054854HIP000059885HIP000072201HIP000072201HIP000073144HIP000086388HIP000086920HIP000088759HIP000090229HIP000090229HIP000094394HIP000094394HIP000095247HIP000095713HIP000096192HIP000096367HIP000096367HIP000099275HIP000099275HIP000108912HIP000110783HIP000111041HIP000111041HIP000114210HIP000114219HIP000134782HIP000236659HIP000337033HIP000358682HIP000420501HIP000436573
BIND 145685;  145803;  182069;  182083;  182103;  182109;  182110;  182111;  182112;  182113;  182114;  182116;  182117;  182118;  182119;  182120;  182121;  182122;  182160;  261893;  55727; 
DIP 175826E; 
MINT MINT-2515544;  MINT-2791056;  MINT-2791154;  MINT-2791422;  MINT-2985160;  MINT-3297793;  MINT-3979536;  MINT-3979774;  MINT-3980165;  MINT-3980250;  MINT-3980267;  MINT-3980284;  MINT-3980301;  MINT-3980318;  MINT-3980335;  MINT-3980387;  MINT-3980404;  MINT-3980421;  MINT-3980438;  MINT-3980455;  MINT-3980472;  MINT-3980489;  MINT-3981118;  MINT-3981786;  MINT-48218;  MINT-48335;  MINT-48490;  MINT-48555;  MINT-48951;  MINT-49072;  MINT-49143;  MINT-49446;  MINT-49490;  MINT-50809;  MINT-51241;  MINT-51249;  MINT-63051;  MINT-63106;  MINT-63350;  MINT-63478;  MINT-63483;  MINT-63605;  MINT-63780;  MINT-64054;  MINT-64131;  MINT-64137;  MINT-64185;  MINT-64286;  MINT-64696;  MINT-64754;  MINT-64779;  MINT-64800;  MINT-64820;  MINT-64833;  MINT-64930;  MINT-64943;  MINT-64945;  MINT-64988;  MINT-65109;  MINT-65172;  MINT-65490;  MINT-65525;  MINT-65594;  MINT-65628;  MINT-65671;  MINT-65728;  MINT-65741;  MINT-65745;  MINT-65802;  MINT-65852;  MINT-65855;  MINT-65878;  MINT-66105;  MINT-66106;  MINT-66208;  MINT-66210;  MINT-66324;  MINT-66684;  MINT-66844;  MINT-66894;  MINT-67072;  MINT-67287;  MINT-67380;  MINT-67503;  MINT-67553;  MINT-67944;  MINT-7302148;  MINT-7899812;  MINT-7945693;  MINT-7947479; 
HPRD 00017;  00032;  00146;  00253;  00302;  00442;  00513;  00564;  00675;  00946;  01070;  01132;  01147;  01206;  01238;  01241;  01261;  01262;  01363;  01447;  01557;  01565;  01721;  01726;  01862;  01908;  02293;  02433;  02461;  02698;  02730;  02799;  02803;  02972;  02994;  03019;  03075;  03144;  03180;  03183;  03203;  03321;  03334;  03382;  03414;  03445;  03457;  03459;  03579;  03605;  03634;  03754;  03756;  03819;  03913;  03965;  04122;  04170;  04184;  04187;  04340;  04494;  04528;  04585;  04833;  05059;  05375;  05428;  05457;  05496;  05639;  05703;  06024;  06170;  06183;  06311;  06712;  06772;  06828;  06848;  06910;  07135;  07191;  07206;  07601;  08687;  08932;  08986;  09071;  09173;  09315;  09326;  09471;  09570;  09653;  09753;  10004;  10037;  10280;  10349;  10379;  10424;  10488;  10603;  10616;  10665;  11028;  11476;  11493;  12093;  12193;  13173;  13628;  14358;  14403;  14543;  14725;  14763;  15307;  15336;  15552;  15627;  15951;  16050;  16246;  16348;  16635;  16669;  16735;  16836;  17187;  17212;  17975;  18051;  18293;  19599; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:7431
KEGG GENES KEGG GENES(7431)
GeneCard GeneCardVIM*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
FR ID FR101428
Accession
Description
Location
PMID
FR ID FR235286
Accession
Description
Location
PMID