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H-Invitational ID: HIT000029398 Accession number: BC000163 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Vimentin;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
7 .. 7 G/A rs192867529 + 5'UTR
46 .. 46 C/T rs11545555 + 5'UTR
98 .. 98 C/T rs200253669 + 5'UTR
103 .. 103 G/C rs3758410 - 5'UTR
177 .. 177 C/T rs11545549 + CDS Nonsynonymous[Pro18Leu]
266 .. 266 A/C rs201189169 + CDS Nonsynonymous[Thr48Pro]
273 .. 273 G/A rs11545553 + CDS Nonsynonymous[Arg50His]
316 .. 316 C/A rs34171769 - CDS Synonymous[Arg64Arg]
328 .. 328 G/C rs11545547 + CDS Synonymous[Val68Val]
352 .. 352 G/T rs111616371 + CDS Synonymous[Gly76Gly]
353 .. 353 G/A rs184701100 + CDS Nonsynonymous[Val77Met]
354 .. 354 T/C rs11545548 + CDS Nonsynonymous[Val77Ala]
406 .. 406 C/T rs144539901 + CDS Synonymous[Thr94Thr]
508 .. 508 T/C rs147857896 + CDS Synonymous[Asn128Asn]
514 .. 514 C/A rs113013980 + CDS Synonymous[Ile130Ile]
520 .. 520 G/A rs11545554 + CDS Synonymous[Leu132Leu]
562 .. 562 G/A rs1042003 + CDS Synonymous[Leu146Leu]
575 .. 575 G/A rs121917775 + CDS Nonsynonymous[Glu151Lys]
578 .. 578 G/A rs141319821 + CDS Nonsynonymous[Glu152Lys]
613 .. 613 G/A rs201551781 + CDS Synonymous[Gln163Gln]
638 .. 638 G/C rs11545550 + CDS Nonsynonymous[Glu172Gln]
666 .. 666 A/C rs149942621 + CDS Nonsynonymous[Asp181Ala]
677 .. 677 C/G rs201325757 + CDS Nonsynonymous[Leu185Val]
678 .. 678 T/C rs11545551 + CDS Nonsynonymous[Leu185Pro]
723 .. 723 A/G rs145760831 + CDS Nonsynonymous[Glu200Gly]
733 .. 733 G/A rs148956484 + CDS Synonymous[Leu203Leu]
736 .. 736 A/G rs143636314 + CDS Synonymous[Gln204Gln]
754 .. 754 T/C rs61761616 + CDS Synonymous[Val210Val]
759 .. 759 A/G rs116800063 + CDS Nonsynonymous[Asn212Ser]
770 .. 770 G/A rs138235394 + CDS Nonsynonymous[Ala216Thr]
838 .. 838 C/T rs141244457 + CDS Synonymous[His238His]
873 .. 873 A/G rs145152785 + CDS Nonsynonymous[Gln250Arg]
890 .. 890 A/G rs139037306 + CDS Nonsynonymous[Ile256Val]
898 .. 898 G/A rs141519986 + CDS Synonymous[Val258Val]
920 .. 920 A/G rs113576905 + CDS Nonsynonymous[Thr266Ala]
921 .. 921 C/T rs150878383 + CDS Nonsynonymous[Thr266Met]
922 .. 922 G/A rs137961338 + CDS Synonymous[Thr266Thr]
937 .. 937 C/T rs4903 + CDS Synonymous[Asp271Asp]
938 .. 938 G/A rs199515026 + CDS Nonsynonymous[Val272Ile]
962 .. 962 G/T rs147133187 + CDS Nonsynonymous[Ala280Ser]
1003 .. 1003 C/G rs11254467 + CDS Synonymous[Ser293Ser]
1023 .. 1023 A/G rs144238562 + CDS Nonsynonymous[Glu300Gly]
1046 .. 1046 G/T rs11545546 + CDS Nonsynonymous[Ala308Ser]
1111 .. 1111 A/G rs147429387 + CDS Synonymous[Glu329Glu]
1118 .. 1118 G/A rs200772352 + CDS Nonsynonymous[Ala332Thr]
1132 .. 1132 C/T rs111932484 + CDS Synonymous[Thr336Thr]
1158 .. 1158 G/A rs116370722 + CDS Nonsynonymous[Arg345His]
1175 .. 1175 T/G rs200740172 + CDS Nonsynonymous[Phe351Val]
1204 .. 1204 C/G rs139818786 + CDS Nonsynonymous[Asp360Glu]
1209 .. 1209 T/C rs114322672 + CDS Nonsynonymous[Ile362Thr]
1216 .. 1216 C/G rs116696668 + CDS Synonymous[Arg364Arg]
1256 .. 1256 C/T rs201530534 + CDS Nonsynonymous[Arg378Cys]
1266 .. 1266 G/A rs35157876 - CDS Nonsynonymous[Arg381His]
1345 .. 1345 G/A rs150986868 + CDS Synonymous[Glu407Glu]
1371 .. 1371 C/A rs11545541 - CDS Nonsynonymous[Pro416Gln]
1381 .. 1381 C/T rs11545556 + CDS Synonymous[Ser419Ser]
1390 .. 1390 C/T rs140482660 + CDS Synonymous[Asn422Asn]
1417 .. 1417 C/T rs150003485 + CDS Synonymous[Leu431Leu]
1424 .. 1424 G/A rs146586974 + CDS Nonsynonymous[Val434Ile]
1509 .. 1509 A/C rs11545543 - CDS Nonsynonymous[His462Pro]
1537 .. 1537 A/T rs144519674 + 3'UTR
1580 .. 1580 C/T rs12667 + 3'UTR
1632 .. 1632 G/A rs112279926 + 3'UTR
1654 .. 1654 A/G rs9235 + 3'UTR
1661 .. 1661 C/G rs186277663 + 3'UTR
1667 .. 1667 C/G/T rs9059 + 3'UTR
1671 .. 1671 A/T rs189996263 + 3'UTR
1672 .. 1672 C/G/T rs9486 + 3'UTR
1687 .. 1687 C/T rs9485 + 3'UTR
1697 ^ 1698 -/A rs71683678 + 3'UTR
1720 .. 1720 G/T rs9484 + 3'UTR
1753 .. 1753 T/C rs11545542 - 3'UTR
1772 .. 1772 C/T rs3249 - 3'UTR
1784 .. 1784 T/- rs71724273 + 3'UTR
1817 .. 1817 G/T rs1049341 - 3'UTR
1820 .. 1820 C/T rs1063520 + 3'UTR
1847 .. 1847 C/A rs3179873 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer