H-InvDB_9.0 released on May 27, 2015. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

Home Quick guide Navi BLAST Site map Download Contact us Help

H-Invitational ID: HIT000029398 Accession number: BC000163 Created date: 26-Mar-2013 Last modified: 27-May-2015 Definition: Vimentin;

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Single Nucleotide Polymorphism (SNP) and indel  Location Variation dbSNP ID Strand CDS/UTR Translation 7 .. 7 G/A rs192867529 + 5'UTR 46 .. 46 C/T rs11545555 + 5'UTR 98 .. 98 C/T rs200253669 + 5'UTR 103 .. 103 G/C rs3758410 - 5'UTR 177 .. 177 C/T rs11545549 + CDS Nonsynonymous[Pro18Leu] 266 .. 266 A/C rs201189169 + CDS Nonsynonymous[Thr48Pro] 273 .. 273 G/A rs11545553 + CDS Nonsynonymous[Arg50His] 316 .. 316 C/A rs34171769 - CDS Synonymous[Arg64Arg] 328 .. 328 G/C rs11545547 + CDS Synonymous[Val68Val] 352 .. 352 G/T rs111616371 + CDS Synonymous[Gly76Gly] 353 .. 353 G/A rs184701100 + CDS Nonsynonymous[Val77Met] 354 .. 354 T/C rs11545548 + CDS Nonsynonymous[Val77Ala] 406 .. 406 C/T rs144539901 + CDS Synonymous[Thr94Thr] 508 .. 508 T/C rs147857896 + CDS Synonymous[Asn128Asn] 514 .. 514 C/A rs113013980 + CDS Synonymous[Ile130Ile] 520 .. 520 G/A rs11545554 + CDS Synonymous[Leu132Leu] 562 .. 562 G/A rs1042003 + CDS Synonymous[Leu146Leu] 575 .. 575 G/A rs121917775 + CDS Nonsynonymous[Glu151Lys] 578 .. 578 G/A rs141319821 + CDS Nonsynonymous[Glu152Lys] 613 .. 613 G/A rs201551781 + CDS Synonymous[Gln163Gln] 638 .. 638 G/C rs11545550 + CDS Nonsynonymous[Glu172Gln] 666 .. 666 A/C rs149942621 + CDS Nonsynonymous[Asp181Ala] 677 .. 677 C/G rs201325757 + CDS Nonsynonymous[Leu185Val] 678 .. 678 T/C rs11545551 + CDS Nonsynonymous[Leu185Pro] 723 .. 723 A/G rs145760831 + CDS Nonsynonymous[Glu200Gly] 733 .. 733 G/A rs148956484 + CDS Synonymous[Leu203Leu] 736 .. 736 A/G rs143636314 + CDS Synonymous[Gln204Gln] 754 .. 754 T/C rs61761616 + CDS Synonymous[Val210Val] 759 .. 759 A/G rs116800063 + CDS Nonsynonymous[Asn212Ser] 770 .. 770 G/A rs138235394 + CDS Nonsynonymous[Ala216Thr] 838 .. 838 C/T rs141244457 + CDS Synonymous[His238His] 873 .. 873 A/G rs145152785 + CDS Nonsynonymous[Gln250Arg] 890 .. 890 A/G rs139037306 + CDS Nonsynonymous[Ile256Val] 898 .. 898 G/A rs141519986 + CDS Synonymous[Val258Val] 920 .. 920 A/G rs113576905 + CDS Nonsynonymous[Thr266Ala] 921 .. 921 C/T rs150878383 + CDS Nonsynonymous[Thr266Met] 922 .. 922 G/A rs137961338 + CDS Synonymous[Thr266Thr] 937 .. 937 C/T rs4903 + CDS Synonymous[Asp271Asp] 938 .. 938 G/A rs199515026 + CDS Nonsynonymous[Val272Ile] 962 .. 962 G/T rs147133187 + CDS Nonsynonymous[Ala280Ser] 1003 .. 1003 C/G rs11254467 + CDS Synonymous[Ser293Ser] 1023 .. 1023 A/G rs144238562 + CDS Nonsynonymous[Glu300Gly] 1046 .. 1046 G/T rs11545546 + CDS Nonsynonymous[Ala308Ser] 1111 .. 1111 A/G rs147429387 + CDS Synonymous[Glu329Glu] 1118 .. 1118 G/A rs200772352 + CDS Nonsynonymous[Ala332Thr] 1132 .. 1132 C/T rs111932484 + CDS Synonymous[Thr336Thr] 1158 .. 1158 G/A rs116370722 + CDS Nonsynonymous[Arg345His] 1175 .. 1175 T/G rs200740172 + CDS Nonsynonymous[Phe351Val] 1204 .. 1204 C/G rs139818786 + CDS Nonsynonymous[Asp360Glu] 1209 .. 1209 T/C rs114322672 + CDS Nonsynonymous[Ile362Thr] 1216 .. 1216 C/G rs116696668 + CDS Synonymous[Arg364Arg] 1256 .. 1256 C/T rs201530534 + CDS Nonsynonymous[Arg378Cys] 1266 .. 1266 G/A rs35157876 - CDS Nonsynonymous[Arg381His] 1345 .. 1345 G/A rs150986868 + CDS Synonymous[Glu407Glu] 1371 .. 1371 C/A rs11545541 - CDS Nonsynonymous[Pro416Gln] 1381 .. 1381 C/T rs11545556 + CDS Synonymous[Ser419Ser] 1390 .. 1390 C/T rs140482660 + CDS Synonymous[Asn422Asn] 1417 .. 1417 C/T rs150003485 + CDS Synonymous[Leu431Leu] 1424 .. 1424 G/A rs146586974 + CDS Nonsynonymous[Val434Ile] 1509 .. 1509 A/C rs11545543 - CDS Nonsynonymous[His462Pro] 1537 .. 1537 A/T rs144519674 + 3'UTR 1580 .. 1580 C/T rs12667 + 3'UTR 1632 .. 1632 G/A rs112279926 + 3'UTR 1654 .. 1654 A/G rs9235 + 3'UTR 1661 .. 1661 C/G rs186277663 + 3'UTR 1667 .. 1667 C/G/T rs9059 + 3'UTR 1671 .. 1671 A/T rs189996263 + 3'UTR 1672 .. 1672 C/G/T rs9486 + 3'UTR 1687 .. 1687 C/T rs9485 + 3'UTR 1697 ^ 1698 -/A rs71683678 + 3'UTR 1720 .. 1720 G/T rs9484 + 3'UTR 1753 .. 1753 T/C rs11545542 - 3'UTR 1772 .. 1772 C/T rs3249 - 3'UTR 1784 .. 1784 T/- rs71724273 + 3'UTR 1817 .. 1817 G/T rs1049341 - 3'UTR 1820 .. 1820 C/T rs1063520 + 3'UTR 1847 .. 1847 C/A rs3179873 + 3'UTR  Microsatellite (Short Tandem Repeat, STR) No data available  Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD) No data available

Repeat  No data available Database links Human-Gene diversity Of Life-style related Diseases(H-GOLD);  Related H-InvDB links VaryGene;  Repeat Mask Viewer;