H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000030595
Accession number:
BC001712
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Vesicle-associated membrane protein-associated protein B/C; VAMP-B/VAMP-C; VAMP-associated protein B/C; VAP-B/VAP-C;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
64 .. 64
G/A
rs111312823
+
5'UTR
146 .. 146
C/G
rs201547974
+
5'UTR
246 .. 246
C/T
rs113533827
+
CDS
Nonsynonymous[Thr23Ile]
283 .. 283
G/A
rs141383583
+
CDS
Synonymous[Pro35Pro]
341 .. 341
A/C
rs150761013
+
CDS
Synonymous[Arg55Arg]
344 .. 344
C/T
rs74315431
+
CDS
Nonsynonymous[Pro56Ser]
352 .. 352
C/T
rs139149560
+
CDS
Synonymous[Ser58Ser]
397 .. 397
A/G
rs144027663
+
CDS
Synonymous[Leu73Leu]
407 .. 407
G/A
rs200276908
+
CDS
Nonsynonymous[Asp77Asn]
568 .. 568
T/G
rs146459055
+
CDS
Nonsynonymous[Asp130Glu]
670 .. 670
C/T
rs139884809
+
CDS
Synonymous[Thr164Thr]
688 .. 688
G/A
rs143144050
+
CDS
Nonsynonymous[Met170Ile]
706 .. 706
G/A
rs199921117
+
CDS
Synonymous[Leu176Leu]
729 .. 729
G/A
rs145483046
+
CDS
Nonsynonymous[Arg184Gln]
836 .. 836
C/T
rs142370781
+
CDS
Nonsynonymous[Leu220Phe]
845 .. 845
C/T
rs144718603
+
CDS
Nonsynonymous[Arg223Trp]
878 .. 878
G/A
rs149215094
+
CDS
Nonsynonymous[Val234Ile]
934 .. 934
A/T
rs201048706
+
3'UTR
985 .. 985
G/A
rs138521885
+
3'UTR
1110 .. 1110
A/G
rs199923819
+
3'UTR
1123 .. 1123
G/A
rs202245892
-
3'UTR
1124 ^ 1125
-/AAAG
rs199588133
+
3'UTR
1254 .. 1254
A/T
rs11557086
+
3'UTR
1258 .. 1258
C/T
rs182950622
+
3'UTR
1377 .. 1377
G/A
rs141496875
+
3'UTR
1506 .. 1506
C/T
rs118055109
+
3'UTR
1626 .. 1626
T/G
rs150303699
+
3'UTR
1663 .. 1663
C/G
rs6070466
+
3'UTR
1684 .. 1684
G/A
rs138920779
+
3'UTR
1686 .. 1686
G/A
rs149433608
+
3'UTR
1725 .. 1725
A/T
rs187590871
+
3'UTR
1794 .. 1794
A/G
rs3746398
-
3'UTR
1847 .. 1847
G/C
rs1059794
+
3'UTR
1849 ^ 1850
-/G
rs34626267
+
3'UTR
1905 .. 1905
T/G
rs76895132
+
3'UTR
1963 .. 1963
C/T
rs12512
-
3'UTR
1974 .. 1974
C/T
rs1059809
+
3'UTR
2009 .. 2009
G/A
rs191660921
+
3'UTR
2090 .. 2090
A/G
rs182712704
+
3'UTR
2130 .. 2130
C/T
rs1802460
+
3'UTR
2175 .. 2175
G/C
rs7400
-
3'UTR
2192 .. 2192
A/G
rs1802459
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene;
Repeat Mask Viewer
;