H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000031599
Accession number:
BC003561
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to AP-1 complex subunit sigma-1A; Adapter-related protein complex 1 sigma-1A subunit; Adaptor protein complex AP-1 sigma-1A subunit; Clathrin assembly protein complex 1 sigma-1A small chain; Clathrin coat assembly protein AP19; Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; HA1 19 kDa subunit; Sigma 1a subunit of AP-1 clathrin; Sigma-adaptin 1A; Sigma1A-adaptin;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
45 .. 45
C/T
rs189658039
+
CDS
Synonymous[Leu6Leu]
128 .. 128
C/T
rs77387752
+
CDS
Synonymous[Arg33Arg]
146 .. 146
C/G
rs148305541
+
CDS
Synonymous[Val39Val]
230 .. 230
C/T
rs77920250
+
CDS
Synonymous[Phe67Phe]
236 .. 236
C/T
rs192601589
+
CDS
Synonymous[Cys69Cys]
388 .. 388
G/C
rs200310743
+
CDS
Nonsynonymous[Gly120Ala]
392 .. 392
G/T
rs142485973
+
CDS
Synonymous[Gly121Gly]
440 .. 440
G/C
rs112015844
+
3'UTR
522 .. 522
C/T
rs1048303
+
3'UTR
622 .. 622
T/C
rs200108336
+
3'UTR
622 ^ 623
-/ACCTCC
rs113505007
+
3'UTR
623 ^ 624
-/ACCTCC
rs67632624
+
3'UTR
626 ^ 627
-/TCCACC
rs71755167
+
3'UTR
631 ^ 632
-/TCCACC
rs4196
-
3'UTR
632 .. 632
C/T
rs150440069
+
3'UTR
633 .. 633
T/C
rs146237323
+
3'UTR
665 .. 665
G/T
rs112799564
+
3'UTR
812 .. 812
C/T
rs1048365
+
3'UTR
840 .. 840
G/A
rs77060326
+
3'UTR
843 .. 843
C/T
rs1048375
+
3'UTR
858 .. 858
G/A
rs1048389
+
3'UTR
873 .. 873
G/T
rs149674622
+
3'UTR
876 .. 876
G/C
rs3188428
+
3'UTR
880 .. 880
A/G
rs13221344
+
3'UTR
924 .. 924
G/T
rs3177697
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;