H-InvDB x AHG DB
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H-Invitational ID: HIT000044418 Accession number: AK124545 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Structural maintenance of chromosomes protein 6.
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
97 .. 97 A/G rs141262260 - 5'UTR
175 .. 175 A/G rs76735114 - 5'UTR
318 .. 318 T/C rs2710661 - 5'UTR
381 .. 381 G/A rs181526706 - 5'UTR
471 .. 471 A/G rs78258304 - 5'UTR
689 .. 689 A/C rs189547880 - 5'UTR
775 .. 775 A/- rs34958627 - 5'UTR
800 .. 800 T/C rs185548033 - 5'UTR
1144 .. 1144 T/C rs192359915 - 5'UTR
1234 .. 1234 G/T rs187676814 - 5'UTR
1369 .. 1369 G/T rs62130872 - 5'UTR
1493 .. 1493 A/G rs184325203 - 5'UTR
1517 .. 1517 A/G rs116199218 - 5'UTR
1518 .. 1518 C/T rs191841402 - 5'UTR
1531 .. 1531 T/C rs77122160 - 5'UTR
1634 .. 1634 A/G rs186942843 - 5'UTR
1811 .. 1811 C/A rs182988817 - 5'UTR
1856 .. 1856 T/A rs73921041 - 5'UTR
1914 .. 1914 C/G rs114121503 - 5'UTR
2026 .. 2026 T/G rs144314682 - 5'UTR
2040 .. 2040 A/G rs200961767 - 5'UTR
2041 .. 2041 G/A rs77008539 - 5'UTR
2189 .. 2189 C/T rs190396334 - 5'UTR
2207 .. 2207 C/G rs111848966 - 5'UTR
2301 .. 2301 A/G rs2710660 - 5'UTR
2326 .. 2326 G/A rs148448583 - 5'UTR
2725 .. 2725 T/G rs187828267 - 5'UTR
2778 .. 2778 A/G rs183904524 - 5'UTR
2929 .. 2929 A/C rs144537696 - 5'UTR
2946 .. 2946 T/C rs190794691 - 5'UTR
2987 .. 2987 A/G rs149728315 - 5'UTR
3084 .. 3084 G/C rs138881226 - 5'UTR
3088 .. 3088 A/G rs61762669 - 5'UTR
3198 .. 3198 A/G rs142161992 - CDS Nonsynonymous[Met27Val]
3251 .. 3251 T/C rs146507725 - CDS Synonymous[Leu44Leu]
3254 .. 3254 C/T rs145251058 - CDS Synonymous[Ser45Ser]
3330 .. 3330 A/G rs184603634 - CDS Nonsynonymous[Ile71Val]
3386 .. 3386 C/G rs10221907 - CDS Nonsynonymous[Ile89Met]
3395 .. 3395 A/T rs200129738 - CDS Synonymous[Thr92Thr]
3407 .. 3407 G/A rs200717829 - CDS Nonsynonymous[Met96Ile]
3515 .. 3515 C/A rs139276977 - CDS Nonsynonymous[Asp132Glu]
3520 .. 3520 G/C rs138478503 - CDS Nonsynonymous[Arg134Thr]
3530 .. 3530 A/G rs200739341 - 3'UTR
3597 .. 3597 A/G rs187823581 - 3'UTR
3654 .. 3654 C/T rs112118857 - 3'UTR
3698 .. 3698 A/T rs2710674 - 3'UTR
3824 .. 3824 A/G rs150905946 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
Tigger1 51 1637 +
Tigger1 1638 1760 +
L1MC4 2110 2538 +
L1ME4a 2827 2970 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer