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H-Invitational ID: HIT000046339 Accession number: AK126466 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;
 
 

Transcript original information
Accession number AK126466.1
CAGE tag ID NA
EST ID NA
Clone Number UTERU3001059
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (ADCK3) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (ADCK3);
Sequence data provider Project:FLJ; Provider:FLJ/HRI; 
Annotation project H-Invitational FLcDNA
Length of cDNA 5524[bp] (No. of exon:20)[A:1180 T:1432 G:1457 C:1455]
Devision HUM
Molecular type mRNA
Library origin Cell type NA
Tissue type uterus
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) AAGGAG; 
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0001648
Genomic location  G-integra Help Chromosome 1
Location 1q42.13
Position 227085237- 227175246
Strand +
Possible duplicated location(s) NA
Gene structure 20 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard GeneCardADCK3;  *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA-genome alignmentcDNA-genome alignment; 

Predicted CDS information
HIP ID HIP000022504
Predicted CDS 2772..4715;  647[aa];  Orientation:+3; 
Codon Adaptation Index (CAI). 0.86

Motif information
ORF

length(647),orf(2772:4715) MAAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQ IGMFLGKVQGQDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPD QSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRLFADPR DSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARPENKQHKQTLSEH ARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAVLG SSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERV RQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMK GGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRR ELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSG FPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQ HKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGY EVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLV PPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCKRQAQQ* 		a.a.
length		 InterPro Name
length(50), motif(315:364) 50 IPR011009 Protein kinase-like domain [Domain]
length(115), motif(319:433) 115 IPR004147 UbiB domain [Domain]
length(127), motif(396:522) 127 IPR011009 Protein kinase-like domain [Domain]

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000046339
H-Inv cluster ID Locus viewHIX0001648
Accession number AK126466.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO;  Splicing isoformSplicing isoform
Coding potential  Help Protein coding; 
Definition Chaperone activity of bc1 complex-like, mitochondrial; Chaperone-ABC1-like; EC=2.7.11.-; aarF domain-containing protein kinase 3; Precursor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q8NI60)  [Identity/coverage = 99.845%/100.0%] to Homo sapiens (Human). protein.
Experimental evidence Protein evidence
PubMed ID 11888884;  14702039;  15489334;  15498874;  16710414;  17344846;  17974005;  18319072;  18319074;  21269460;  ALL; 
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ADCK3
HGNC aliases "chaperone-ABC1 (activity of bc1 complex, S.pombe)-like", "chaperone, ABC1 activity of bc1 complex like (S. pombe)", "chaperone, ABC1 activity of bc1 complex homolog (S. pombe)"
HGNC name aarF domain containing kinase 3
DDBJ NA
UniProt ADCK3
EC number EC 2.7.11.-Protein-serine/threonine kinases; 
GGDB
(GlycoGene Database)
 Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000022504
No. of interaction 23
Interaction partner(s) HIP000021385;  HIP000023960;  HIP000026585;  HIP000026585;  HIP000036366;  HIP000048821;  HIP000053966;  HIP000054822;  HIP000058896;  HIP000059460;  HIP000074321;  HIP000075289;  HIP000076337;  HIP000084466;  HIP000096767;  HIP000097392;  HIP000100543;  HIP000114585;  HIP000116926;  HIP000138121;  HIP000249412;  HIP000335321;  HIP000435860; 
BIND NA
DIP 116837E; 
MINT MINT-66678;  MINT-8079030; 
HPRD 02202;  05375; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard GeneCardADCK3;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT; 
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
FR ID FR306988
Accession
Description
Location
PMID

Gene ontology information
Molecular function transferase activity, transferring phosphorus-containing groups (GO:0016772); 

Subcellular localization information  Last modified:27-May-2015
WoLF PSORT mitochondria;  cytosol;  peroxisome;  Other; 
Target P Not predicted
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP) GTOP Last modified:27-May-2015
Start End PDB_ID E-value Identity Coverage SCOP_ID
267 323 1y74A1 7e-22 17.5 57/57 a.194.1.1
315 597 1zylA1 3e-14 10.5 277/325 d.144.1.6
Related H-InvDB links GTOP GTOP

Gene expression information  H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene AGhsA241008; 
Affymetrix
GeneChip		 HG-Focus NA
HG-U133 218168_s_at;  222542_x_at; 
HG-U133A 218168_s_at; 
HG-U133A_2 218168_s_at; 
HG-U133B 222542_x_at; 
HG-U133_Plus_2 218168_s_at;  222542_x_at; 
HG-U95 45334_at;  64312_at; 
HG-U95A NA
HG-U95B 45334_at; 
HG-U95C 64312_at; 
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2383358;  2383363;  2383364;  2383365;  2383370;  2383378;  2383389;  2383390;  2383391;  2383392;  2383393;  2383394;  2383395;  2383396;  2383404;  2383407;  2383409;  2383411;  2383413;  2383416;  2383419;  2383420;  2383421;  2383422;  2383424;  2383425;  2459040;  3471200;  3661308; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P85593; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P85598; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator; 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
72 .. 72 A/G rs187646928 + 5'UTR
90 .. 90 T/G rs1800671 + 5'UTR
143 .. 143 C/T rs192567835 + 5'UTR
158 .. 158 A/G rs114893547 + 5'UTR
209 .. 209 C/T rs115762664 + 5'UTR
210 .. 210 G/A rs139814638 + 5'UTR
226 .. 226 T/C rs1800672 + 5'UTR
338 .. 338 G/C rs16846631 + 5'UTR
375 .. 375 A/- rs71861771 + 5'UTR
380 .. 380 A/G rs185108304 + 5'UTR
393 .. 393 G/A rs190356243 + 5'UTR
410 .. 410 C/T rs1800673 + 5'UTR
502 .. 502 A/G rs71648404 + 5'UTR
577 .. 577 A/G rs192701789 + 5'UTR
588 .. 588 G/A rs1800674 + 5'UTR
601 .. 601 G/T rs184715537 + 5'UTR
789 .. 789 G/T rs142359473 + 5'UTR
865 .. 865 G/A rs12068726 + 5'UTR
868 .. 868 T/C rs116594577 + 5'UTR
917 .. 917 T/A rs151283928 + 5'UTR
959 .. 959 T/C rs6676065 + 5'UTR
961 .. 961 T/A rs6676067 + 5'UTR
1040 .. 1040 T/C rs7530352 + 5'UTR
1100 .. 1100 A/T rs140488664 + 5'UTR
1118 .. 1118 G/A rs188684684 + 5'UTR
1155 .. 1155 T/A rs180759917 + 5'UTR
1164 .. 1164 C/A rs185373506 + 5'UTR
1171 .. 1171 C/T rs189394688 + 5'UTR
1173 .. 1173 G/A rs149996145 + 5'UTR
1191 ^ 1192 -/G rs35074916 + 5'UTR
1235 .. 1235 C/T rs146544825 + 5'UTR
1236 .. 1236 G/A rs181998204 + 5'UTR
1260 .. 1260 G/T rs141434674 + 5'UTR
1301 .. 1301 G/A rs201564908 + 5'UTR
1503 .. 1503 T/C rs145136435 + 5'UTR
1654 .. 1654 G/A rs186736576 + 5'UTR
1667 .. 1667 A/G rs138973233 + 5'UTR
1701 .. 1701 C/T rs2855564 + 5'UTR
1723 .. 1723 A/G rs6426555 + 5'UTR
1850 .. 1850 A/G rs192038467 + 5'UTR
1921 .. 1921 A/G rs183482270 + 5'UTR
1927 .. 1927 C/T rs186320033 + 5'UTR
2007 .. 2007 G/T rs16846644 + 5'UTR
2082 .. 2082 G/C rs180736874 + 5'UTR
2186 .. 2186 C/A rs138360609 + 5'UTR
2187 .. 2187 G/A rs12035060 + 5'UTR
2242 .. 2242 C/T rs149324253 + 5'UTR
2282 .. 2282 C/T rs182779372 + 5'UTR
2283 .. 2283 G/A rs187692774 + 5'UTR
2345 .. 2345 G/A rs193250427 + 5'UTR
2427 .. 2427 T/A rs72758693 + 5'UTR
2449 .. 2449 C/T rs145529997 + 5'UTR
2491 .. 2491 T/C rs185383882 + 5'UTR
2504 .. 2504 G/A rs113452228 + 5'UTR
2516 .. 2516 C/T rs189414759 + 5'UTR
2524 .. 2524 A/G rs148844221 + 5'UTR
2526 .. 2526 C/T rs142535232 + 5'UTR
2561 .. 2561 C/A rs182018909 + 5'UTR
2628 .. 2628 G/A rs12730465 + 5'UTR
2772 .. 2772 A/G rs199604256 + CDS Nonsynonymous[Met1Val]
2782 .. 2782 T/A rs202075418 + CDS Nonsynonymous[Ile4Lys]
2806 .. 2806 C/T rs200052870 + CDS Nonsynonymous[Ala12Val]
2821 .. 2821 A/G rs150221608 + CDS Nonsynonymous[Lys17Arg]
2833 .. 2833 C/T rs142184584 + CDS Nonsynonymous[Ala21Val]
2834 .. 2834 G/A rs11549709 + CDS Synonymous[Ala21Ala]
2838 .. 2838 G/A rs35582308 + CDS Nonsynonymous[Val23Met]
2849 .. 2849 C/T rs150541057 + CDS Synonymous[His26His]
2867 .. 2867 C/T rs199919057 + CDS Synonymous[Ile32Ile]
2871 .. 2871 G/A rs142125927 + CDS Nonsynonymous[Gly34Arg]
2888 .. 2888 A/G rs11549708 + CDS Synonymous[Ala39Ala]
2908 .. 2908 C/T rs187123516 + CDS Nonsynonymous[Thr46Met]
2942 .. 2942 G/C rs200123840 + CDS Nonsynonymous[Lys57Asn]
3002 .. 3002 G/A rs201037948 + CDS Synonymous[Gly77Gly]
3009 .. 3009 C/T rs76249490 + CDS Nonsynonymous[His80Tyr]
3011 .. 3011 C/T rs113667144 + CDS Synonymous[His80His]
3012 .. 3012 T/C rs200349511 + CDS Nonsynonymous[Phe81Leu]
3026 .. 3026 T/G rs2297411 + CDS Nonsynonymous[His85Gln]
3028 .. 3028 C/T rs150377969 + CDS Nonsynonymous[Ala86Val]
3029 .. 3029 A/C rs137872711 + CDS Synonymous[Ala86Ala]
3030 .. 3030 G/A rs138572539 + CDS Nonsynonymous[Ala87Thr]
3034 .. 3034 G/T rs141687205 + CDS Nonsynonymous[Gly88Val]
3062 .. 3062 C/T rs111529228 + CDS Synonymous[Ser97Ser]
3063 .. 3063 G/T rs200000374 + CDS Nonsynonymous[Ala98Ser]
3069 .. 3069 G/T rs150696959 + CDS Nonsynonymous[Asp100Tyr]
3096 .. 3096 C/G rs201479287 + CDS Nonsynonymous[His109Asp]
3106 .. 3106 G/A rs147889685 + CDS Nonsynonymous[Ser112Asn]
3155 .. 3155 C/T rs139970507 + CDS Synonymous[Ala128Ala]
3173 .. 3173 C/T rs200182503 + CDS Synonymous[Ala134Ala]
3238 .. 3238 T/C rs147812454 + CDS Nonsynonymous[Met156Thr]
3243 .. 3243 T/C rs142652509 + CDS Nonsynonymous[Phe158Leu]
3292 .. 3292 C/A rs181579601 + CDS Nonsynonymous[Thr174Lys]
3296 .. 3296 C/T rs201787750 + CDS Synonymous[Ala175Ala]
3335 .. 3335 C/T rs140897240 + CDS Synonymous[Pro188Pro]
3358 .. 3358 C/T rs200762439 + CDS Nonsynonymous[Thr196Met]
3365 .. 3365 C/T rs138547552 + CDS Synonymous[Ser198Ser]
3372 .. 3372 G/T rs188599627 + CDS Nonsynonymous[Ala201Ser]
3376 .. 3376 G/A rs145350362 + CDS Nonsynonymous[Arg202Gln]
3382 .. 3382 G/A rs200541514 + CDS Nonsynonymous[Arg204Gln]
3389 .. 3389 G/A rs115855910 + CDS Synonymous[Val206Val]
3408 .. 3408 C/T rs119468005 + CDS Nonsynonymous[Arg213Trp]
3450 .. 3450 G/A rs199694417 + CDS Nonsynonymous[Gly227Arg]
3494 .. 3494 C/- rs35757883 + CDS
3501 .. 3501 G/C rs199619932 + CDS Nonsynonymous[Gly244Arg]
3513 .. 3513 G/A rs148376283 + CDS Nonsynonymous[Val248Met]
3516 .. 3516 C/T rs199958142 + CDS Synonymous[Leu249Leu]
3551 .. 3551 A/G rs147447166 + CDS Synonymous[Ala260Ala]
3556 .. 3556 G/A rs145422777 + CDS Nonsynonymous[Arg262Gln]
3565 .. 3565 G/A rs199696414 + CDS Nonsynonymous[Arg265His]
3568 .. 3568 C/T rs149924675 + CDS Nonsynonymous[Thr266Met]
3582 .. 3582 C/T rs145034527 + CDS Nonsynonymous[Arg271Cys]
3586 .. 3586 G/A/T rs119468006 + CDS
3625 .. 3625 A/C rs143493998 + CDS Nonsynonymous[Asp285Ala]
3644 .. 3644 C/T rs200849486 + CDS Synonymous[Pro291Pro]
3647 .. 3647 C/G rs200155917 + CDS Nonsynonymous[His292Gln]
3662 .. 3662 C/T rs55968053 + CDS Synonymous[Phe297Phe]
3666 .. 3666 C/T rs201908721 + CDS Nonsynonymous[Arg299Trp]
3672 .. 3672 C/T rs140246430 + CDS Nonsynonymous[Arg301Trp]
3680 .. 3680 C/T rs202036077 + CDS Synonymous[Ser303Ser]
3719 .. 3719 C/T rs55637780 + CDS Synonymous[Leu316Leu]
3760 .. 3760 A/G rs150243147 + CDS Nonsynonymous[Tyr330Cys]
3762 .. 3762 T/C rs201334858 + CDS Nonsynonymous[Phe331Leu]
3764 .. 3764 C/T rs41303129 + CDS Synonymous[Phe331Phe]
3780 .. 3780 G/A rs143816043 + CDS Nonsynonymous[Ala337Thr]
3782 .. 3782 C/T rs36006006 + CDS Synonymous[Ala337Ala]
3791 .. 3791 C/T rs181558991 + CDS Synonymous[Ser340Ser]
3793 .. 3793 T/C rs55798516 + CDS Nonsynonymous[Ile341Thr]
3824 .. 3824 C/T rs55958233 + CDS Synonymous[Gly351Gly]
3860 .. 3860 C/T rs139570869 + CDS Synonymous[Gly363Gly]
3879 .. 3879 A/G rs180784380 + CDS Nonsynonymous[Ser370Gly]
3891 .. 3891 A/C rs146751657 + CDS Nonsynonymous[Asn374His]
3956 .. 3956 C/T rs17849927 + CDS Synonymous[Ile395Ile]
3959 .. 3959 C/T rs139133094 + CDS Synonymous[Asp396Asp]
3964 .. 3964 T/C rs199921339 + CDS Nonsynonymous[Leu398Pro]
3986 .. 3986 G/A rs149048093 + CDS Synonymous[Glu405Glu]
4017 .. 4017 C/T rs151292389 + CDS Nonsynonymous[Arg416Cys]
4022 .. 4022 G/A rs202227926 + CDS Synonymous[Lys417Lys]
4029 .. 4029 G/A rs147097934 + CDS Nonsynonymous[Asp420Asn]
4035 .. 4035 C/T rs200375779 + CDS Synonymous[Leu422Leu]
4057 .. 4057 A/G rs144147839 + CDS Nonsynonymous[Tyr429Cys]
4103 .. 4103 C/T rs138727410 + CDS Synonymous[Thr444Thr]
4149 .. 4149 A/G rs149364914 + CDS Nonsynonymous[Ser460Gly]
4161 .. 4161 C/T rs139900636 + CDS Nonsynonymous[Arg464Trp]
4167 .. 4167 G/A rs201134290 + CDS Nonsynonymous[Glu466Lys]
4180 .. 4180 A/G rs200800365 + CDS Nonsynonymous[Asn470Ser]
4193 .. 4193 G/A rs202132812 + CDS Synonymous[Leu474Leu]
4201 .. 4201 G/- rs34158214 + CDS
4211 .. 4211 T/C rs12593 - CDS Synonymous[Phe480Phe]
4250 .. 4250 C/A rs150918577 + CDS Nonsynonymous[Asn493Lys]
4304 .. 4304 G/A rs201337210 + CDS Synonymous[Thr511Thr]
4305 .. 4305 C/T rs149682899 + CDS Nonsynonymous[Arg512Trp]
4306 .. 4306 G/A rs200115323 + CDS Nonsynonymous[Arg512Gln]
4312 .. 4312 A/G rs119468008 + CDS Nonsynonymous[Tyr514Cys]
4327 .. 4327 C/G rs141260985 + CDS Nonsynonymous[Thr519Ser]
4338 .. 4338 A/G rs147730489 + CDS Nonsynonymous[Ile523Val]
4362 .. 4362 G/A rs200930703 + CDS Nonsynonymous[Asp531Asn]
4376 .. 4376 G/C rs201158713 + CDS Nonsynonymous[Glu535Asp]
4377 .. 4377 A/G rs200403220 + CDS Nonsynonymous[Thr536Ala]
4381 .. 4381 T/G rs199724504 + CDS Nonsynonymous[Val537Gly]
4383 .. 4383 C/T rs201331131 + CDS Nonsynonymous[Arg538Trp]
4388 .. 4388 G/A rs142600066 + CDS Synonymous[Ala539Ala]
4415 .. 4415 C/T rs141423403 + CDS Synonymous[Thr548Thr]
4416 .. 4416 G/A rs119468009 + CDS Nonsynonymous[Gly549Ser]
4422 .. 4422 G/A rs119468004 + CDS Nonsynonymous[Glu551Lys]
4436 .. 4436 G/A rs199874519 + CDS Nonsynonymous[Met555Ile]
4443 .. 4443 G/A rs142894121 + CDS Nonsynonymous[Ala558Thr]
4448 .. 4448 C/G rs200963031 + CDS Nonsynonymous[His559Gln]
4481 .. 4481 C/T rs139305619 + CDS Synonymous[Phe570Phe]
4487 .. 4487 C/T rs3738725 + CDS Synonymous[Ser572Ser]
4491 .. 4491 G/A rs202058665 + CDS Nonsynonymous[Glu574Lys]
4510 .. 4510 C/T rs199581236 + CDS Nonsynonymous[Thr580Ile]
4523 .. 4523 C/T rs201865243 + CDS Synonymous[Thr584Thr]
4526 .. 4526 G/C rs201171077 + CDS Nonsynonymous[Glu585Asp]
4528 .. 4528 A/G rs113308613 + CDS Nonsynonymous[Lys586Arg]
4536 .. 4536 A/C rs142051104 + CDS Nonsynonymous[Asn589His]
4547 .. 4547 C/T rs7545723 + CDS Synonymous[Pro592Pro]
4568 .. 4568 C/T rs139551241 + CDS Synonymous[Leu599Leu]
4571 .. 4571 C/G rs74589348 + CDS Synonymous[Val600Val]
4576 .. 4576 C/A/G rs61995958 + CDS
4587 .. 4587 A/C rs143650593 + CDS Nonsynonymous[Thr606Pro]
4592 .. 4592 C/T rs201618750 + CDS Synonymous[Tyr607Tyr]
4595 .. 4595 C/T rs141270350 + CDS Synonymous[Ser608Ser]
4637 .. 4637 G/A rs191944347 + CDS Synonymous[Lys622Lys]
4647 .. 4647 C/T rs141725964 + CDS Nonsynonymous[Arg626Cys]
4670 .. 4670 C/T rs150569155 + CDS Synonymous[Phe633Phe]
4671 .. 4671 G/A rs149335528 + CDS Nonsynonymous[Glu634Lys]
4685 .. 4685 C/T rs56043893 + CDS Synonymous[Ser638Ser]
4724 .. 4724 G/A rs200743857 + 3'UTR
4848 .. 4848 G/A rs149820067 + 3'UTR
4945 .. 4945 G/A rs117808661 + 3'UTR
4949 .. 4949 G/A rs188462608 + 3'UTR
5064 .. 5064 G/A rs113041399 + 3'UTR
5099 .. 5099 G/A rs113631619 + 3'UTR
5100 .. 5100 A/T rs112529851 + 3'UTR
5105 ^ 5106 -/T rs199664948 + 3'UTR
5159 .. 5159 C/G rs12567953 + 3'UTR
5180 .. 5180 G/A rs8159 - 3'UTR
5225 .. 5225 G/A rs142056615 + 3'UTR
5359 .. 5359 G/A rs115542970 + 3'UTR
5372 .. 5372 G/A rs181352749 + 3'UTR
5397 .. 5397 G/A rs10482 - 3'UTR
5443 .. 5443 C/T rs16846762 + 3'UTR
5477 .. 5477 G/A rs145779574 + 3'UTR
5506 .. 5506 A/G rs12565212 + 3'UTR
5523 ^ 5524 -/T rs140711993 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
Type Start End Strand
L1ME3Cz 89 270 -
L1ME3Cz 297 419 -
AluSq2 420 719 -
L1ME3Cz 720 839 -
L1ME3Cz 883 1090 -
AluY 1091 1378 -
L1ME3Cz 1379 1894 -
AluJr 2181 2277 -
AluSx 2308 2474 -
AluSq2 2475 2548 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD); 
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer;