H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
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Definition*
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---
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H-Invitational ID:
HIT000052284
Accession number:
BC039893
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Stromal cell-derived factor 1; SDF-1; hSDF-1; C-X-C motif chemokine 12; Intercrine reduced in hepatomas; IRH; hIRH; Pre-B cell growth-stimulating factor; PBSF; Contains: SDF-1-beta(3-72); Contains: SDF-1-alpha(3-67); Precursor;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Transcript annotation summary
H-Inv ID
HIT000052284
H-Inv cluster ID
HIX0008784
H-Inv protein ID
HIP000079212
Accession number
BC039893.1
CAGE tag ID
NA
EST ID
NA
Genomic location
Chromosome
10
Location
10q11.21
Position
44872581- 44880523
Strand
-
Transcript feature
NO;
Splicing isoform
Coding potential
Protein coding;
Definition
Similar to Stromal cell-derived factor 1; SDF-1; hSDF-1; C-X-C motif chemokine 12; Intercrine reduced in hepatomas; IRH; hIRH; Pre-B cell growth-stimulating factor; PBSF; Contains: SDF-1-beta(3-72); Contains: SDF-1-alpha(3-67); Precursor;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
P48061
) [Identity/coverage = 100.0%/95.7%] to Homo sapiens (Human). protein.
Gene family / group
NA
Gene symbol/name
HGNC symbol
CXCL12
HGNC aliases
"stromal cell-derived factor 1"
HGNC name
chemokine (C-X-C motif) ligand 12
DDBJ
CXCL12
UniProt
CXCL12
EC number
NA
KEGG metabolic pathway
NA
PubMed ID
7490086
;
8752281
;
9384579
;
9427609
;
9618518
;
10446158
;
10954912
;
11069075
;
11859124
;
14525775
;
14702039
;
15164054
;
15489334
;
15588815
;
15741341
;
16107333
;
16626895
;
16725153
;
17264079
;
17357154
;
18799424
;
18802065
;
19255243
;
19551879
;
20077567
;
ALL
;
Related H-InvDB links
Similarity Search Tool
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:6387
;
KEGG GENES
KEGG GENES(6387)
;
GeneCard
CXCL12
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA