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H-Invitational ID: HIT000052733 Accession number: BC042650 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Protocadherin gamma-C4; PCDH-gamma-C4; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
29 ^ 30 -/G rs145099347 + 5'UTR
63 .. 63 G/C rs199625514 + 5'UTR
136 .. 136 C/T rs138463062 + CDS Nonsynonymous[Ala15Val]
194 .. 194 G/A rs77402299 + CDS Synonymous[Pro34Pro]
210 .. 210 C/A rs114678203 + CDS Nonsynonymous[Gln40Lys]
234 .. 234 G/A rs201756706 + CDS Nonsynonymous[Val48Ile]
256 .. 256 A/G rs147409155 + CDS Nonsynonymous[Asp55Gly]
259 .. 259 C/T rs139641513 + CDS Nonsynonymous[Thr56Met]
357 .. 357 C/T rs143779180 + CDS Nonsynonymous[Pro89Ser]
575 .. 575 T/C rs147216126 + CDS Synonymous[Asp161Asp]
616 .. 616 A/G rs76923861 + CDS Nonsynonymous[Asn175Ser]
711 .. 711 G/A rs114766079 + CDS Nonsynonymous[Asp207Asn]
763 .. 763 G/A rs201857404 + CDS Nonsynonymous[Gly224Asp]
829 .. 829 G/C rs142273728 + CDS Nonsynonymous[Ser246Thr]
899 .. 899 G/A rs151239937 + CDS Synonymous[Pro269Pro]
915 .. 915 G/A rs114142606 + CDS Nonsynonymous[Gly275Ser]
938 .. 938 T/C rs2078071 - CDS Synonymous[Ser282Ser]
941 .. 941 T/C rs146615755 + CDS Synonymous[Gly283Gly]
978 .. 978 C/T rs141349392 + CDS Nonsynonymous[His296Tyr]
984 .. 984 A/G rs145186028 + CDS Nonsynonymous[Thr298Ala]
1009 .. 1009 G/T rs190955361 + CDS Nonsynonymous[Gly306Val]
1054 .. 1054 G/A rs145871538 + CDS Nonsynonymous[Arg321Gln]
1172 .. 1172 C/T rs148995268 + CDS Synonymous[Pro360Pro]
1183 .. 1183 A/C rs201073884 + CDS Nonsynonymous[Glu364Ala]
1188 .. 1188 G/A rs111842066 + CDS Nonsynonymous[Gly366Ser]
1190 .. 1190 C/G rs143039217 + CDS Synonymous[Gly366Gly]
1238 .. 1238 C/T rs148184642 + CDS Synonymous[Asn382Asn]
1256 .. 1256 C/T rs116799150 + CDS Synonymous[Arg388Arg]
1403 .. 1403 C/G rs200150307 + CDS Synonymous[Thr437Thr]
1419 .. 1419 C/T rs114847835 + CDS Nonsynonymous[Leu443Phe]
1427 .. 1427 T/G rs187495695 + CDS Nonsynonymous[Ile445Met]
1472 .. 1472 T/C rs200580042 + CDS Synonymous[His460His]
1495 .. 1495 A/G rs142766421 + CDS Nonsynonymous[Asn468Ser]
1532 .. 1532 G/A rs61749029 + CDS Synonymous[Ser480Ser]
1559 .. 1559 A/G rs201009079 + CDS Synonymous[Gln489Gln]
1575 .. 1575 C/T rs143362044 + CDS Nonsynonymous[Arg495Cys]
1618 .. 1618 G/A rs200541479 + CDS AA-STOP[Trp509*]
1634 .. 1634 C/T rs202071188 + CDS Synonymous[Val514Val]
1653 .. 1653 G/A rs147534370 + CDS Nonsynonymous[Val521Ile]
1685 .. 1685 C/T rs201024828 + CDS Synonymous[Gly531Gly]
1686 .. 1686 A/G rs2233613 + CDS Nonsynonymous[Ser532Gly]
1791 .. 1791 G/A rs76613492 + CDS Nonsynonymous[Gly567Arg]
1847 .. 1847 T/C rs115159796 + CDS Synonymous[Asn585Asn]
1857 .. 1857 C/A rs191106767 + CDS Nonsynonymous[Gln589Lys]
2093 .. 2093 C/A rs146235929 + 3'UTR
2111 .. 2111 G/C rs4912608 + 3'UTR
2186 .. 2186 T/G rs148447880 + 3'UTR
2348 .. 2348 G/A rs142624814 + 3'UTR
2369 .. 2369 T/C rs113814137 + 3'UTR
2375 .. 2375 C/T rs150999050 + 3'UTR
2382 .. 2382 T/G rs187622252 + 3'UTR
2571 .. 2571 A/G rs192947391 + 3'UTR
2654 .. 2654 T/C rs140884268 + 3'UTR
2677 .. 2677 G/A rs111365449 + 3'UTR
2868 .. 2868 A/G rs78180647 + 3'UTR
2936 .. 2936 G/A rs185198109 + 3'UTR
3029 .. 3029 C/T rs147780926 + 3'UTR
3322 .. 3322 C/T rs141207714 + 3'UTR
3341 .. 3341 G/T rs189734474 + 3'UTR
3397 .. 3397 C/T rs112402554 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
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 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer