H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000054067 Accession number: BC054489 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Clathrin heavy chain 1; Clathrin heavy chain on chromosome 17; CLH-17;
 
 

Motif information
ORF

length(1675),orf(228:5255)
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQV
VIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMK
AHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG
CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAS
FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV
FFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALR
MAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRR
FQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQK
IVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIV
DVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEW
LVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIE
LFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYI
EIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVE
KRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRR
KDPELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADL
...
a.a.
length
InterPro Name
length(363), motif(1:363) 363 IPR016025 Clathrin, heavy chain, linker/propeller domain [Domain]
length(325), motif(5:329) 325 IPR001473 Clathrin, heavy chain, propeller, N-terminal [Domain]
length(38), motif(19:56) 38 IPR022365 Clathrin, heavy chain, propeller repeat [Repeat]
length(39), motif(149:187) 39 IPR022365 Clathrin, heavy chain, propeller repeat [Repeat]
length(36), motif(199:234) 36 IPR022365 Clathrin, heavy chain, propeller repeat [Repeat]
length(24), motif(331:354) 24 IPR015348 Clathrin, heavy chain, linker, core motif [Domain]
length(156), motif(332:487) 156 IPR016024 Armadillo-type fold [Domain]
length(336), motif(444:779) 336 IPR016024 Armadillo-type fold [Domain]
length(147), motif(537:683) 147 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(143), motif(537:679) 143 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(137), motif(542:678) 137 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(143), motif(686:828) 143 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(140), motif(688:827) 140 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(223), motif(703:925) 223 IPR011990 Tetratricopeptide-like helical domain [Domain]
length(86), motif(803:888) 86 IPR016024 Armadillo-type fold [Domain]
length(140), motif(833:972) 140 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(129), motif(840:968) 129 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(159), motif(887:1045) 159 IPR016024 Armadillo-type fold [Domain]
length(141), motif(979:1119) 141 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(146), motif(979:1124) 146 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(144), motif(1037:1180) 144 IPR016024 Armadillo-type fold [Domain]
length(125), motif(1041:1165) 125 IPR011990 Tetratricopeptide-like helical domain [Domain]
length(142), motif(1128:1269) 142 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(139), motif(1129:1267) 139 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(334), motif(1183:1516) 334 IPR016024 Armadillo-type fold [Domain]
length(335), motif(1183:1517) 335 IPR011990 Tetratricopeptide-like helical domain [Domain]
length(147), motif(1274:1420) 147 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(143), motif(1275:1417) 143 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(143), motif(1423:1565) 143 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(160), motif(1423:1582) 160 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(144), motif(1423:1566) 144 IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat [Repeat]
length(119), motif(1518:1636) 119 IPR011990 Tetratricopeptide-like helical domain [Domain]