H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000056966 Accession number: BX648319 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protein SDE2 homolog;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
32 .. 32 G/C rs199904241 - CDS Synonymous[Leu7Leu]
47 .. 47 C/T rs201347746 - CDS Synonymous[Gly12Gly]
49 .. 49 C/T rs150202613 - CDS Nonsynonymous[Pro13Leu]
78 .. 78 G/T rs200698120 - CDS Nonsynonymous[Ala23Ser]
83 .. 83 G/A rs201120938 - CDS Synonymous[Ser24Ser]
140 .. 140 A/T rs200918535 - CDS Synonymous[Pro43Pro]
361 .. 361 C/T rs200982731 - CDS Nonsynonymous[Ala117Val]
395 .. 395 A/G rs184898819 - CDS Synonymous[Arg128Arg]
403 .. 403 A/G rs199840109 - CDS Nonsynonymous[Glu131Gly]
444 .. 444 G/A rs200329712 - CDS Nonsynonymous[Val145Ile]
632 .. 632 G/A rs202100514 - CDS Synonymous[Ala207Ala]
712 .. 712 A/G rs199998745 - CDS Nonsynonymous[Asp234Gly]
775 .. 775 G/A rs141939942 - CDS Nonsynonymous[Gly255Asp]
779 .. 779 C/T rs200328355 - CDS Synonymous[Val256Val]
780 .. 780 G/A rs182179659 - CDS Nonsynonymous[Glu257Lys]
838 .. 838 A/G rs41268719 - CDS Nonsynonymous[His276Arg]
897 .. 897 G/T rs61998244 - CDS Nonsynonymous[Asp296Tyr]
947 .. 947 G/T rs34348128 - CDS Nonsynonymous[Met312Ile]
952 .. 952 C/T rs61731742 - CDS Nonsynonymous[Thr314Ile]
979 .. 979 A/C rs113721886 - CDS Nonsynonymous[Lys323Thr]
999 .. 999 A/G rs112422303 - CDS Nonsynonymous[Ile330Val]
1012 .. 1012 C/G rs190593519 - CDS Nonsynonymous[Pro334Arg]
1103 .. 1103 C/T rs201203772 - CDS Synonymous[Asn364Asn]
1153 .. 1153 A/G rs76285584 - CDS Nonsynonymous[Asp381Gly]
1168 .. 1168 A/G rs184725920 - CDS Nonsynonymous[Asp386Gly]
1178 .. 1178 G/A rs201730097 - CDS Synonymous[Ala389Ala]
1203 .. 1203 T/A rs193190607 - CDS Nonsynonymous[Leu398Met]
1217 .. 1217 G/A rs200116300 - CDS Synonymous[Glu402Glu]
1327 .. 1327 C/T rs74756813 - CDS Nonsynonymous[Pro439Leu]
1406 .. 1406 A/G rs200544214 - 3'UTR
1641 .. 1641 T/A rs147593112 - 3'UTR
1767 .. 1767 G/A rs76843836 - 3'UTR
1807 .. 1807 G/T rs142542568 - 3'UTR
1808 .. 1808 G/T rs184242613 - 3'UTR
1890 .. 1890 G/A rs149192547 - 3'UTR
1935 .. 1935 G/A rs145378495 - 3'UTR
1947 .. 1947 T/C rs61835211 - 3'UTR
1967 .. 1967 C/A rs61835210 - 3'UTR
1981 .. 1981 A/G rs150033284 - 3'UTR
2062 .. 2062 C/T rs192567859 - 3'UTR
2063 .. 2063 G/A rs187567406 - 3'UTR
2125 .. 2125 G/A rs182862864 - 3'UTR
2147 .. 2147 A/G rs116049995 - 3'UTR
2149 .. 2149 A/G rs116538901 - 3'UTR
2192 .. 2192 T/G rs146386773 - 3'UTR
2198 .. 2198 A/G rs143612910 - 3'UTR
2210 .. 2210 T/G rs71646758 - 3'UTR
2378 .. 2378 G/C rs115533329 - 3'UTR
2390 .. 2390 T/C rs192301222 - 3'UTR
2435 .. 2435 G/A rs140005759 - 3'UTR
2453 .. 2453 A/G rs150643022 - 3'UTR
2460 .. 2460 A/G rs141866182 - 3'UTR
2570 .. 2570 A/G rs2755101 - 3'UTR
2599 .. 2599 T/A rs188419824 - 3'UTR
2600 .. 2600 T/C rs182914314 - 3'UTR
2657 .. 2657 G/C rs111766307 - 3'UTR
2680 .. 2680 C/T rs144568055 - 3'UTR
2708 .. 2708 G/A rs142795418 - 3'UTR
2719 .. 2719 A/T rs138953356 - 3'UTR
2865 .. 2865 G/T rs146091318 - 3'UTR
2877 .. 2877 C/T rs190738824 - 3'UTR
2895 .. 2895 C/G rs6664468 - 3'UTR
3045 .. 3045 G/A rs74148409 - 3'UTR
3067 .. 3067 C/T rs76220707 - 3'UTR
3282 .. 3282 A/G rs117173944 - 3'UTR
3309 .. 3309 T/G rs186169822 - 3'UTR
3359 .. 3359 A/G rs137859180 - 3'UTR
3585 .. 3585 A/G rs150296379 - 3'UTR
3589 .. 3589 A/G rs182896360 - 3'UTR
3696 .. 3696 T/A rs140237187 - 3'UTR
3789 .. 3789 G/A rs191058439 - 3'UTR
3859 .. 3859 T/C rs187180320 - 3'UTR
3873 .. 3873 G/A rs181060320 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
L1MEf 1516 1837 -
AluY 1838 2140 -
L1MEf 2141 2400 -
AluSq2 2401 2704 -
L1MEf 2705 2965 -
FLAM_C 2966 3114 +
L1MEf 3115 3570 -
L1MEf 3638 3967 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer